Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim43cP86449 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim43cP86449 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim43cP86449 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trim43cP86449 Gm21956-201ENSMUST00000179946 522 ntBASIC21.86■■□□□ 1.09
Trim43cP86449 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trim43cP86449 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim43cP86449 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim43cP86449 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim43cP86449 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Trim43cP86449 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.85■■□□□ 1.09
Trim43cP86449 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim43cP86449 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim43cP86449 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.85■■□□□ 1.09
Trim43cP86449 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim43cP86449 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim43cP86449 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim43cP86449 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim43cP86449 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim43cP86449 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim43cP86449 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim43cP86449 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim43cP86449 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim43cP86449 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim43cP86449 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.84■■□□□ 1.09
Trim43cP86449 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.84■■□□□ 1.09
Trim43cP86449 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim43cP86449 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim43cP86449 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Trim43cP86449 Mir6236-201ENSMUST00000184437 123 ntBASIC21.84■■□□□ 1.09
Trim43cP86449 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trim43cP86449 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim43cP86449 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.84■■□□□ 1.09
Trim43cP86449 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim43cP86449 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim43cP86449 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim43cP86449 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim43cP86449 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim43cP86449 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim43cP86449 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim43cP86449 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.83■■□□□ 1.09
Trim43cP86449 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim43cP86449 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.83■■□□□ 1.09
Trim43cP86449 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.83■■□□□ 1.08
Trim43cP86449 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim43cP86449 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim43cP86449 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Trim43cP86449 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim43cP86449 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim43cP86449 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Trim43cP86449 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.82■■□□□ 1.08
Trim43cP86449 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.82■■□□□ 1.08
Trim43cP86449 Gm9847-201ENSMUST00000052528 599 ntBASIC21.82■■□□□ 1.08
Trim43cP86449 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim43cP86449 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Trim43cP86449 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim43cP86449 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim43cP86449 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Trim43cP86449 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim43cP86449 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.81■■□□□ 1.08
Trim43cP86449 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim43cP86449 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim43cP86449 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim43cP86449 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim43cP86449 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim43cP86449 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Trim43cP86449 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim43cP86449 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim43cP86449 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Trim43cP86449 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim43cP86449 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim43cP86449 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim43cP86449 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim43cP86449 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim43cP86449 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.79■■□□□ 1.08
Trim43cP86449 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Trim43cP86449 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.79■■□□□ 1.08
Trim43cP86449 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim43cP86449 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim43cP86449 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim43cP86449 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim43cP86449 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.79■■□□□ 1.08
Trim43cP86449 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim43cP86449 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim43cP86449 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim43cP86449 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim43cP86449 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim43cP86449 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim43cP86449 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim43cP86449 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.78■■□□□ 1.08
Trim43cP86449 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.78■■□□□ 1.08
Trim43cP86449 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43cP86449 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43cP86449 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43cP86449 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43cP86449 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43cP86449 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Trim43cP86449 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Trim43cP86449 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim43cP86449 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms