Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ldb1P70662 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ldb1P70662 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ldb1P70662 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ldb1P70662 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ldb1P70662 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ldb1P70662 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ldb1P70662 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ldb1P70662 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ldb1P70662 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ldb1P70662 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ldb1P70662 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ldb1P70662 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ldb1P70662 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ldb1P70662 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ldb1P70662 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ldb1P70662 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ldb1P70662 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ldb1P70662 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ldb1P70662 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.93■□□□□ 0.78
Ldb1P70662 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ldb1P70662 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ldb1P70662 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ldb1P70662 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ldb1P70662 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
Ldb1P70662 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ldb1P70662 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ldb1P70662 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ldb1P70662 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ldb1P70662 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ldb1P70662 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ldb1P70662 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ldb1P70662 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ldb1P70662 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ldb1P70662 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ldb1P70662 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ldb1P70662 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ldb1P70662 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ldb1P70662 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ldb1P70662 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ldb1P70662 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ldb1P70662 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ldb1P70662 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ldb1P70662 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ldb1P70662 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Ldb1P70662 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ldb1P70662 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ldb1P70662 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.9■□□□□ 0.78
Ldb1P70662 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ldb1P70662 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ldb1P70662 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ldb1P70662 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.9■□□□□ 0.78
Ldb1P70662 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ldb1P70662 Gm43530-201ENSMUST00000195920 274 ntBASIC19.9■□□□□ 0.78
Ldb1P70662 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ldb1P70662 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
Ldb1P70662 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ldb1P70662 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ldb1P70662 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ldb1P70662 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ldb1P70662 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ldb1P70662 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ldb1P70662 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.89■□□□□ 0.77
Ldb1P70662 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.89■□□□□ 0.77
Ldb1P70662 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ldb1P70662 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.89■□□□□ 0.77
Ldb1P70662 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ldb1P70662 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ldb1P70662 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ldb1P70662 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.88■□□□□ 0.77
Ldb1P70662 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ldb1P70662 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ldb1P70662 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ldb1P70662 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.88■□□□□ 0.77
Ldb1P70662 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.88■□□□□ 0.77
Ldb1P70662 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ldb1P70662 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ldb1P70662 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ldb1P70662 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ldb1P70662 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Ldb1P70662 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ldb1P70662 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ldb1P70662 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.87■□□□□ 0.77
Ldb1P70662 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Ldb1P70662 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ldb1P70662 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.87■□□□□ 0.77
Ldb1P70662 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ldb1P70662 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ldb1P70662 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ldb1P70662 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ldb1P70662 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Ldb1P70662 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ldb1P70662 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ldb1P70662 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Ldb1P70662 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ldb1P70662 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ldb1P70662 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ldb1P70662 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.86■□□□□ 0.77
Ldb1P70662 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ldb1P70662 Notumos-201ENSMUST00000151998 2659 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms