Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Surf6P70279 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Surf6P70279 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Surf6P70279 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Surf6P70279 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Surf6P70279 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Surf6P70279 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Surf6P70279 Gm14523-201ENSMUST00000117260 558 ntBASIC20.69■□□□□ 0.9
Surf6P70279 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.69■□□□□ 0.9
Surf6P70279 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Surf6P70279 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.69■□□□□ 0.9
Surf6P70279 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Surf6P70279 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.68■□□□□ 0.9
Surf6P70279 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Surf6P70279 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Surf6P70279 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Surf6P70279 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Surf6P70279 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Surf6P70279 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Surf6P70279 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.67■□□□□ 0.9
Surf6P70279 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Surf6P70279 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Surf6P70279 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.67■□□□□ 0.9
Surf6P70279 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Surf6P70279 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Surf6P70279 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Surf6P70279 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Surf6P70279 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.66■□□□□ 0.9
Surf6P70279 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Surf6P70279 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Surf6P70279 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Surf6P70279 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Surf6P70279 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.66■□□□□ 0.9
Surf6P70279 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Surf6P70279 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Surf6P70279 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Surf6P70279 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Surf6P70279 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Surf6P70279 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Surf6P70279 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Surf6P70279 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Surf6P70279 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Surf6P70279 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Surf6P70279 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Surf6P70279 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Surf6P70279 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Surf6P70279 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Surf6P70279 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Surf6P70279 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Surf6P70279 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.65■□□□□ 0.9
Surf6P70279 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Surf6P70279 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Surf6P70279 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Surf6P70279 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Surf6P70279 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Surf6P70279 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Surf6P70279 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Surf6P70279 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.64■□□□□ 0.9
Surf6P70279 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Surf6P70279 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Surf6P70279 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Surf6P70279 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Surf6P70279 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Surf6P70279 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Surf6P70279 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Surf6P70279 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Surf6P70279 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Surf6P70279 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Surf6P70279 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Surf6P70279 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.63■□□□□ 0.89
Surf6P70279 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Surf6P70279 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Surf6P70279 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Surf6P70279 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Surf6P70279 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Surf6P70279 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Surf6P70279 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Surf6P70279 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.62■□□□□ 0.89
Surf6P70279 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Surf6P70279 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Surf6P70279 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Surf6P70279 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Surf6P70279 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.61■□□□□ 0.89
Surf6P70279 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Surf6P70279 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Surf6P70279 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Surf6P70279 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Surf6P70279 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Surf6P70279 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Surf6P70279 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Surf6P70279 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.6■□□□□ 0.89
Surf6P70279 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Surf6P70279 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.6■□□□□ 0.89
Surf6P70279 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Surf6P70279 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Surf6P70279 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.6■□□□□ 0.89
Surf6P70279 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Surf6P70279 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Surf6P70279 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.6■□□□□ 0.89
Surf6P70279 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms