Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ybx1P62960 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ybx1P62960 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ybx1P62960 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ybx1P62960 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ybx1P62960 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ybx1P62960 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.64■□□□□ 0.89
Ybx1P62960 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.64■□□□□ 0.89
Ybx1P62960 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.64■□□□□ 0.89
Ybx1P62960 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.63■□□□□ 0.89
Ybx1P62960 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ybx1P62960 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ybx1P62960 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ybx1P62960 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ybx1P62960 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ybx1P62960 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ybx1P62960 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ybx1P62960 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.62■□□□□ 0.89
Ybx1P62960 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ybx1P62960 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ybx1P62960 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ybx1P62960 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ybx1P62960 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ybx1P62960 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ybx1P62960 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ybx1P62960 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.62■□□□□ 0.89
Ybx1P62960 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.62■□□□□ 0.89
Ybx1P62960 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ybx1P62960 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ybx1P62960 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ybx1P62960 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ybx1P62960 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ybx1P62960 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ybx1P62960 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ybx1P62960 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ybx1P62960 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.61■□□□□ 0.89
Ybx1P62960 Gm10033-202ENSMUST00000211874 928 ntBASIC20.61■□□□□ 0.89
Ybx1P62960 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ybx1P62960 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ybx1P62960 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ybx1P62960 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ybx1P62960 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ybx1P62960 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ybx1P62960 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ybx1P62960 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ybx1P62960 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ybx1P62960 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ybx1P62960 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ybx1P62960 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Ybx1P62960 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ybx1P62960 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ybx1P62960 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ybx1P62960 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ybx1P62960 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ybx1P62960 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ybx1P62960 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ybx1P62960 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ybx1P62960 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.58■□□□□ 0.89
Ybx1P62960 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ybx1P62960 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ybx1P62960 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ybx1P62960 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ybx1P62960 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ybx1P62960 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ybx1P62960 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Ybx1P62960 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Ybx1P62960 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.58■□□□□ 0.88
Ybx1P62960 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ybx1P62960 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ybx1P62960 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ybx1P62960 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Ybx1P62960 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ybx1P62960 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ybx1P62960 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ybx1P62960 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ybx1P62960 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx1P62960 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx1P62960 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx1P62960 Gm18671-201ENSMUST00000214826 683 ntBASIC20.56■□□□□ 0.88
Ybx1P62960 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.56■□□□□ 0.88
Ybx1P62960 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ybx1P62960 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.56■□□□□ 0.88
Ybx1P62960 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx1P62960 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx1P62960 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx1P62960 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx1P62960 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.56■□□□□ 0.88
Ybx1P62960 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx1P62960 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx1P62960 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ybx1P62960 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx1P62960 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Ybx1P62960 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx1P62960 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx1P62960 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx1P62960 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx1P62960 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx1P62960 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.54■□□□□ 0.88
Ybx1P62960 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx1P62960 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms