Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.56■□□□□ 0.4
Lsm6P62313 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.56■□□□□ 0.4
Lsm6P62313 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lsm6P62313 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm6P62313 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm6P62313 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm6P62313 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm6P62313 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm6P62313 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.55■□□□□ 0.4
Lsm6P62313 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.55■□□□□ 0.4
Lsm6P62313 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm6P62313 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm6P62313 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lsm6P62313 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm6P62313 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm6P62313 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm6P62313 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm6P62313 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lsm6P62313 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.55■□□□□ 0.4
Lsm6P62313 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm6P62313 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.54■□□□□ 0.4
Lsm6P62313 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.54■□□□□ 0.4
Lsm6P62313 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
Lsm6P62313 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm6P62313 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.53■□□□□ 0.4
Lsm6P62313 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lsm6P62313 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lsm6P62313 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm6P62313 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Lsm6P62313 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm6P62313 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm6P62313 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm6P62313 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm6P62313 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm6P62313 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm6P62313 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm6P62313 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm6P62313 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm6P62313 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Lsm6P62313 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm6P62313 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lsm6P62313 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.51■□□□□ 0.39
Lsm6P62313 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lsm6P62313 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Lsm6P62313 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm6P62313 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm6P62313 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm6P62313 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.51■□□□□ 0.39
Lsm6P62313 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm6P62313 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm6P62313 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm6P62313 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm6P62313 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm6P62313 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm6P62313 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm6P62313 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Lsm6P62313 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm6P62313 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm6P62313 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm6P62313 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm6P62313 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm6P62313 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm6P62313 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm6P62313 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lsm6P62313 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Lsm6P62313 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm6P62313 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.49■□□□□ 0.39
Lsm6P62313 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm6P62313 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm6P62313 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm6P62313 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm6P62313 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Lsm6P62313 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm6P62313 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.48■□□□□ 0.39
Lsm6P62313 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm6P62313 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Lsm6P62313 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm6P62313 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm6P62313 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm6P62313 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.48■□□□□ 0.39
Lsm6P62313 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms