Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ythdf1P59326 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ythdf1P59326 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ythdf1P59326 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ythdf1P59326 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ythdf1P59326 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ythdf1P59326 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ythdf1P59326 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ythdf1P59326 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ythdf1P59326 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ythdf1P59326 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ythdf1P59326 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ythdf1P59326 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ythdf1P59326 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ythdf1P59326 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ythdf1P59326 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ythdf1P59326 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ythdf1P59326 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ythdf1P59326 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ythdf1P59326 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.28■□□□□ 0.68
Ythdf1P59326 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ythdf1P59326 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Ythdf1P59326 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.27■□□□□ 0.68
Ythdf1P59326 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ythdf1P59326 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ythdf1P59326 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.27■□□□□ 0.68
Ythdf1P59326 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.27■□□□□ 0.68
Ythdf1P59326 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.27■□□□□ 0.68
Ythdf1P59326 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ythdf1P59326 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Ythdf1P59326 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ythdf1P59326 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ythdf1P59326 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ythdf1P59326 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ythdf1P59326 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ythdf1P59326 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ythdf1P59326 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ythdf1P59326 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ythdf1P59326 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ythdf1P59326 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ythdf1P59326 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ythdf1P59326 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ythdf1P59326 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ythdf1P59326 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ythdf1P59326 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ythdf1P59326 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ythdf1P59326 Gm8503-201ENSMUST00000118131 455 ntBASIC19.25■□□□□ 0.67
Ythdf1P59326 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.25■□□□□ 0.67
Ythdf1P59326 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ythdf1P59326 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ythdf1P59326 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ythdf1P59326 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ythdf1P59326 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ythdf1P59326 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ythdf1P59326 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ythdf1P59326 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ythdf1P59326 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ythdf1P59326 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ythdf1P59326 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.24■□□□□ 0.67
Ythdf1P59326 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ythdf1P59326 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ythdf1P59326 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ythdf1P59326 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ythdf1P59326 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ythdf1P59326 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ythdf1P59326 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ythdf1P59326 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ythdf1P59326 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ythdf1P59326 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ythdf1P59326 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ythdf1P59326 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.23■□□□□ 0.67
Ythdf1P59326 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.23■□□□□ 0.67
Ythdf1P59326 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.23■□□□□ 0.67
Ythdf1P59326 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ythdf1P59326 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ythdf1P59326 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ythdf1P59326 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ythdf1P59326 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ythdf1P59326 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ythdf1P59326 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ythdf1P59326 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ythdf1P59326 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ythdf1P59326 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.22■□□□□ 0.67
Ythdf1P59326 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ythdf1P59326 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ythdf1P59326 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ythdf1P59326 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ythdf1P59326 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ythdf1P59326 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Ythdf1P59326 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ythdf1P59326 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ythdf1P59326 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ythdf1P59326 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.21■□□□□ 0.67
Ythdf1P59326 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ythdf1P59326 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ythdf1P59326 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ythdf1P59326 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.66
Ythdf1P59326 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ythdf1P59326 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ythdf1P59326 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms