Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cpne2P59108 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpne2P59108 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpne2P59108 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.74■□□□□ 0.27
Cpne2P59108 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpne2P59108 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpne2P59108 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpne2P59108 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpne2P59108 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cpne2P59108 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.73■□□□□ 0.27
Cpne2P59108 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne2P59108 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.73■□□□□ 0.27
Cpne2P59108 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne2P59108 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne2P59108 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne2P59108 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne2P59108 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne2P59108 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.72■□□□□ 0.27
Cpne2P59108 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.72■□□□□ 0.27
Cpne2P59108 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne2P59108 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne2P59108 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne2P59108 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne2P59108 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne2P59108 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cpne2P59108 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne2P59108 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne2P59108 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.71■□□□□ 0.27
Cpne2P59108 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne2P59108 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne2P59108 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne2P59108 Cap2-205ENSMUST00000225824 1634 ntBASIC16.71■□□□□ 0.27
Cpne2P59108 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne2P59108 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne2P59108 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cpne2P59108 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Cpne2P59108 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne2P59108 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne2P59108 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne2P59108 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.71■□□□□ 0.27
Cpne2P59108 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne2P59108 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cpne2P59108 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cpne2P59108 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.7■□□□□ 0.26
Cpne2P59108 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne2P59108 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.7■□□□□ 0.26
Cpne2P59108 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne2P59108 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne2P59108 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.69■□□□□ 0.26
Cpne2P59108 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cpne2P59108 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne2P59108 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne2P59108 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cpne2P59108 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne2P59108 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.69■□□□□ 0.26
Cpne2P59108 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne2P59108 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cpne2P59108 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne2P59108 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cpne2P59108 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.68■□□□□ 0.26
Cpne2P59108 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.68■□□□□ 0.26
Cpne2P59108 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cpne2P59108 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne2P59108 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne2P59108 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne2P59108 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne2P59108 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cpne2P59108 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cpne2P59108 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne2P59108 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne2P59108 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne2P59108 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.67■□□□□ 0.26
Cpne2P59108 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cpne2P59108 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne2P59108 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.67■□□□□ 0.26
Cpne2P59108 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms