Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.47■□□□□ 0.87
Ddx6P54823 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ddx6P54823 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx6P54823 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.46■□□□□ 0.87
Ddx6P54823 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx6P54823 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx6P54823 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx6P54823 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx6P54823 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx6P54823 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx6P54823 Gm27405-201ENSMUST00000184201 112 ntBASIC20.46■□□□□ 0.87
Ddx6P54823 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.46■□□□□ 0.87
Ddx6P54823 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx6P54823 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx6P54823 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx6P54823 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx6P54823 Gm26571-201ENSMUST00000181399 666 ntBASIC20.45■□□□□ 0.86
Ddx6P54823 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx6P54823 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx6P54823 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx6P54823 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx6P54823 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx6P54823 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx6P54823 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx6P54823 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ddx6P54823 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx6P54823 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.44■□□□□ 0.86
Ddx6P54823 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx6P54823 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx6P54823 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.44■□□□□ 0.86
Ddx6P54823 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx6P54823 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx6P54823 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx6P54823 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx6P54823 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Ddx6P54823 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.43■□□□□ 0.86
Ddx6P54823 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ddx6P54823 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx6P54823 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.43■□□□□ 0.86
Ddx6P54823 Gm18671-201ENSMUST00000214826 683 ntBASIC20.43■□□□□ 0.86
Ddx6P54823 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ddx6P54823 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx6P54823 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx6P54823 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx6P54823 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.42■□□□□ 0.86
Ddx6P54823 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx6P54823 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx6P54823 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.42■□□□□ 0.86
Ddx6P54823 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx6P54823 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx6P54823 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.41■□□□□ 0.86
Ddx6P54823 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.41■□□□□ 0.86
Ddx6P54823 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx6P54823 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx6P54823 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx6P54823 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx6P54823 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.4■□□□□ 0.86
Ddx6P54823 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ddx6P54823 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx6P54823 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ddx6P54823 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Ddx6P54823 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx6P54823 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx6P54823 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.39■□□□□ 0.85
Ddx6P54823 Gm42778-201ENSMUST00000199644 553 ntBASIC20.39■□□□□ 0.85
Ddx6P54823 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.39■□□□□ 0.85
Ddx6P54823 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.39■□□□□ 0.85
Ddx6P54823 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx6P54823 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Ddx6P54823 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx6P54823 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ddx6P54823 Gm10033-202ENSMUST00000211874 928 ntBASIC20.38■□□□□ 0.85
Ddx6P54823 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx6P54823 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx6P54823 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx6P54823 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx6P54823 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx6P54823 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx6P54823 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.37■□□□□ 0.85
Ddx6P54823 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx6P54823 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx6P54823 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ddx6P54823 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx6P54823 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
Ddx6P54823 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx6P54823 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx6P54823 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx6P54823 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ddx6P54823 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx6P54823 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx6P54823 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.36■□□□□ 0.85
Ddx6P54823 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx6P54823 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx6P54823 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.36■□□□□ 0.85
Ddx6P54823 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx6P54823 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx6P54823 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx6P54823 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx6P54823 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.35■□□□□ 0.85
Ddx6P54823 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms