Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Limk1P53668 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Limk1P53668 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Limk1P53668 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Limk1P53668 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Limk1P53668 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Limk1P53668 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Limk1P53668 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Limk1P53668 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Limk1P53668 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
Limk1P53668 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk1P53668 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk1P53668 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.6■□□□□ 0.73
Limk1P53668 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Limk1P53668 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Limk1P53668 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Limk1P53668 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Limk1P53668 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Limk1P53668 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Limk1P53668 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.59■□□□□ 0.73
Limk1P53668 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Limk1P53668 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Limk1P53668 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.59■□□□□ 0.73
Limk1P53668 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Limk1P53668 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Limk1P53668 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Limk1P53668 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Limk1P53668 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Limk1P53668 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Limk1P53668 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Limk1P53668 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Limk1P53668 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Limk1P53668 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Limk1P53668 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Limk1P53668 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
Limk1P53668 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Limk1P53668 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Limk1P53668 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk1P53668 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk1P53668 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk1P53668 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Limk1P53668 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.56■□□□□ 0.72
Limk1P53668 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.56■□□□□ 0.72
Limk1P53668 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Limk1P53668 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.56■□□□□ 0.72
Limk1P53668 Gm12441-201ENSMUST00000121806 588 ntBASIC19.56■□□□□ 0.72
Limk1P53668 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.56■□□□□ 0.72
Limk1P53668 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.56■□□□□ 0.72
Limk1P53668 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Limk1P53668 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Limk1P53668 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Limk1P53668 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.56■□□□□ 0.72
Limk1P53668 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Limk1P53668 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.55■□□□□ 0.72
Limk1P53668 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk1P53668 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Limk1P53668 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.55■□□□□ 0.72
Limk1P53668 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.55■□□□□ 0.72
Limk1P53668 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.55■□□□□ 0.72
Limk1P53668 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk1P53668 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk1P53668 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk1P53668 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Limk1P53668 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk1P53668 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk1P53668 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Limk1P53668 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk1P53668 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Limk1P53668 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.54■□□□□ 0.72
Limk1P53668 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.54■□□□□ 0.72
Limk1P53668 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk1P53668 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk1P53668 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk1P53668 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.54■□□□□ 0.72
Limk1P53668 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk1P53668 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk1P53668 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Limk1P53668 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.53■□□□□ 0.72
Limk1P53668 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Limk1P53668 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Limk1P53668 Gm22325-201ENSMUST00000158904 308 ntBASIC19.53■□□□□ 0.72
Limk1P53668 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.53■□□□□ 0.72
Limk1P53668 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.53■□□□□ 0.72
Limk1P53668 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.53■□□□□ 0.72
Limk1P53668 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Limk1P53668 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Limk1P53668 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
Limk1P53668 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Limk1P53668 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Limk1P53668 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Limk1P53668 Gm11421-201ENSMUST00000122124 294 ntBASIC19.52■□□□□ 0.72
Limk1P53668 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Limk1P53668 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.52■□□□□ 0.72
Limk1P53668 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Limk1P53668 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Limk1P53668 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Limk1P53668 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Limk1P53668 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Limk1P53668 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.52■□□□□ 0.71
Limk1P53668 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms