Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pdx1P52946 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdx1P52946 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdx1P52946 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdx1P52946 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.82■□□□□ 0.76
Pdx1P52946 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdx1P52946 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pdx1P52946 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pdx1P52946 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.82■□□□□ 0.76
Pdx1P52946 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pdx1P52946 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdx1P52946 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdx1P52946 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.81■□□□□ 0.76
Pdx1P52946 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdx1P52946 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pdx1P52946 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.81■□□□□ 0.76
Pdx1P52946 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdx1P52946 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pdx1P52946 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
Pdx1P52946 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdx1P52946 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdx1P52946 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdx1P52946 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pdx1P52946 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pdx1P52946 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdx1P52946 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdx1P52946 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdx1P52946 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdx1P52946 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.79■□□□□ 0.76
Pdx1P52946 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pdx1P52946 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.79■□□□□ 0.76
Pdx1P52946 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdx1P52946 Mir6236-201ENSMUST00000184437 123 ntBASIC19.79■□□□□ 0.76
Pdx1P52946 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.79■□□□□ 0.76
Pdx1P52946 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Pdx1P52946 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdx1P52946 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pdx1P52946 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdx1P52946 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdx1P52946 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdx1P52946 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.78■□□□□ 0.76
Pdx1P52946 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdx1P52946 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdx1P52946 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdx1P52946 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.77■□□□□ 0.76
Pdx1P52946 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pdx1P52946 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdx1P52946 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdx1P52946 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdx1P52946 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdx1P52946 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdx1P52946 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pdx1P52946 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdx1P52946 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdx1P52946 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pdx1P52946 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pdx1P52946 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdx1P52946 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdx1P52946 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Pdx1P52946 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdx1P52946 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdx1P52946 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pdx1P52946 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pdx1P52946 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pdx1P52946 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdx1P52946 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdx1P52946 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdx1P52946 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdx1P52946 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Pdx1P52946 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pdx1P52946 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdx1P52946 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdx1P52946 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdx1P52946 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdx1P52946 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdx1P52946 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pdx1P52946 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.74■□□□□ 0.75
Pdx1P52946 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pdx1P52946 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdx1P52946 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdx1P52946 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdx1P52946 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdx1P52946 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Pdx1P52946 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.74■□□□□ 0.75
Pdx1P52946 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pdx1P52946 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdx1P52946 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdx1P52946 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdx1P52946 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdx1P52946 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.74■□□□□ 0.75
Pdx1P52946 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.73■□□□□ 0.75
Pdx1P52946 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdx1P52946 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms