Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.23■□□□□ 0.67
Rph3aP47708 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rph3aP47708 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rph3aP47708 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rph3aP47708 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rph3aP47708 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rph3aP47708 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rph3aP47708 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rph3aP47708 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rph3aP47708 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rph3aP47708 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rph3aP47708 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rph3aP47708 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rph3aP47708 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rph3aP47708 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rph3aP47708 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rph3aP47708 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rph3aP47708 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rph3aP47708 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.22■□□□□ 0.67
Rph3aP47708 Golgb1-201ENSMUST00000023534 498 ntBASIC19.22■□□□□ 0.67
Rph3aP47708 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rph3aP47708 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rph3aP47708 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rph3aP47708 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rph3aP47708 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rph3aP47708 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rph3aP47708 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rph3aP47708 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rph3aP47708 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.21■□□□□ 0.67
Rph3aP47708 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rph3aP47708 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rph3aP47708 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rph3aP47708 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rph3aP47708 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rph3aP47708 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rph3aP47708 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rph3aP47708 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rph3aP47708 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rph3aP47708 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rph3aP47708 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.2■□□□□ 0.66
Rph3aP47708 Gm9847-201ENSMUST00000052528 599 ntBASIC19.2■□□□□ 0.66
Rph3aP47708 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rph3aP47708 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rph3aP47708 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rph3aP47708 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rph3aP47708 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rph3aP47708 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.19■□□□□ 0.66
Rph3aP47708 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rph3aP47708 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rph3aP47708 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Rph3aP47708 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rph3aP47708 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rph3aP47708 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rph3aP47708 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rph3aP47708 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rph3aP47708 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.19■□□□□ 0.66
Rph3aP47708 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rph3aP47708 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rph3aP47708 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rph3aP47708 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Rph3aP47708 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rph3aP47708 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Rph3aP47708 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rph3aP47708 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rph3aP47708 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rph3aP47708 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rph3aP47708 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rph3aP47708 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rph3aP47708 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rph3aP47708 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rph3aP47708 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rph3aP47708 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rph3aP47708 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rph3aP47708 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rph3aP47708 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rph3aP47708 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rph3aP47708 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rph3aP47708 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rph3aP47708 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rph3aP47708 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rph3aP47708 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rph3aP47708 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rph3aP47708 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rph3aP47708 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rph3aP47708 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rph3aP47708 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rph3aP47708 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.14■□□□□ 0.66
Rph3aP47708 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms