Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-6P43688 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-6P43688 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-6P43688 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.95■□□□□ 0.62
Nkx2-6P43688 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.95■□□□□ 0.62
Nkx2-6P43688 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-6P43688 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-6P43688 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-6P43688 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-6P43688 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-6P43688 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-6P43688 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-6P43688 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-6P43688 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Nkx2-6P43688 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-6P43688 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.94■□□□□ 0.62
Nkx2-6P43688 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-6P43688 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-6P43688 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.93■□□□□ 0.62
Nkx2-6P43688 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-6P43688 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-6P43688 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.93■□□□□ 0.62
Nkx2-6P43688 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.93■□□□□ 0.62
Nkx2-6P43688 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
Nkx2-6P43688 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-6P43688 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Nkx2-6P43688 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-6P43688 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-6P43688 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-6P43688 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-6P43688 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-6P43688 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nkx2-6P43688 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nkx2-6P43688 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nkx2-6P43688 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-6P43688 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.9■□□□□ 0.62
Nkx2-6P43688 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.9■□□□□ 0.62
Nkx2-6P43688 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nkx2-6P43688 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nkx2-6P43688 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nkx2-6P43688 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-6P43688 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-6P43688 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.89■□□□□ 0.61
Nkx2-6P43688 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Nkx2-6P43688 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-6P43688 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.89■□□□□ 0.61
Nkx2-6P43688 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-6P43688 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-6P43688 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Nkx2-6P43688 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nkx2-6P43688 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.88■□□□□ 0.61
Nkx2-6P43688 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nkx2-6P43688 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-6P43688 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-6P43688 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-6P43688 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-6P43688 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nkx2-6P43688 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-6P43688 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-6P43688 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nkx2-6P43688 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-6P43688 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.87■□□□□ 0.61
Nkx2-6P43688 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.87■□□□□ 0.61
Nkx2-6P43688 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-6P43688 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-6P43688 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-6P43688 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-6P43688 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-6P43688 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-6P43688 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-6P43688 Gm10849-201ENSMUST00000100397 618 ntBASIC18.86■□□□□ 0.61
Nkx2-6P43688 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
Nkx2-6P43688 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.86■□□□□ 0.61
Nkx2-6P43688 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.86■□□□□ 0.61
Nkx2-6P43688 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms