Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox18P43680 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox18P43680 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Sox18P43680 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.21■□□□□ 0.67
Sox18P43680 Gm20760-201ENSMUST00000179197 648 ntBASIC19.21■□□□□ 0.67
Sox18P43680 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.21■□□□□ 0.67
Sox18P43680 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.21■□□□□ 0.67
Sox18P43680 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.21■□□□□ 0.67
Sox18P43680 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox18P43680 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sox18P43680 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
Sox18P43680 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox18P43680 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sox18P43680 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox18P43680 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox18P43680 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox18P43680 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sox18P43680 Mir7071-201ENSMUST00000184847 69 ntBASIC19.2■□□□□ 0.66
Sox18P43680 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.2■□□□□ 0.66
Sox18P43680 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox18P43680 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sox18P43680 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.19■□□□□ 0.66
Sox18P43680 Gm9988-201ENSMUST00000069786 435 ntBASIC19.19■□□□□ 0.66
Sox18P43680 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox18P43680 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox18P43680 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sox18P43680 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.18■□□□□ 0.66
Sox18P43680 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sox18P43680 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox18P43680 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox18P43680 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sox18P43680 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sox18P43680 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sox18P43680 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Sox18P43680 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.18■□□□□ 0.66
Sox18P43680 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.18■□□□□ 0.66
Sox18P43680 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sox18P43680 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.18■□□□□ 0.66
Sox18P43680 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Sox18P43680 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox18P43680 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Sox18P43680 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.17■□□□□ 0.66
Sox18P43680 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Sox18P43680 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox18P43680 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox18P43680 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox18P43680 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox18P43680 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox18P43680 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox18P43680 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox18P43680 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.16■□□□□ 0.66
Sox18P43680 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox18P43680 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox18P43680 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox18P43680 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox18P43680 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.16■□□□□ 0.66
Sox18P43680 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sox18P43680 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sox18P43680 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox18P43680 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sox18P43680 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Sox18P43680 Gm8520-201ENSMUST00000186517 868 ntBASIC19.15■□□□□ 0.66
Sox18P43680 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox18P43680 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sox18P43680 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox18P43680 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Sox18P43680 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Sox18P43680 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox18P43680 Gm13234-201ENSMUST00000120010 747 ntBASIC19.14■□□□□ 0.65
Sox18P43680 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sox18P43680 Gm4968-201ENSMUST00000071458 858 ntBASIC19.14■□□□□ 0.65
Sox18P43680 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox18P43680 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.14■□□□□ 0.65
Sox18P43680 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Sox18P43680 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sox18P43680 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Sox18P43680 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.13■□□□□ 0.65
Sox18P43680 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox18P43680 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox18P43680 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox18P43680 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox18P43680 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox18P43680 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox18P43680 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox18P43680 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox18P43680 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox18P43680 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.13■□□□□ 0.65
Sox18P43680 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox18P43680 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox18P43680 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox18P43680 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sox18P43680 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox18P43680 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Sox18P43680 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sox18P43680 Mir5133-201ENSMUST00000174955 77 ntBASIC19.12■□□□□ 0.65
Sox18P43680 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sox18P43680 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox18P43680 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox18P43680 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sox18P43680 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms