Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hist1h1aP43275 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.45■□□□□ 0.22
Hist1h1aP43275 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hist1h1aP43275 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hist1h1aP43275 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hist1h1aP43275 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hist1h1aP43275 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.44■□□□□ 0.22
Hist1h1aP43275 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hist1h1aP43275 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.44■□□□□ 0.22
Hist1h1aP43275 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hist1h1aP43275 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hist1h1aP43275 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.44■□□□□ 0.22
Hist1h1aP43275 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hist1h1aP43275 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Hist1h1aP43275 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hist1h1aP43275 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hist1h1aP43275 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.43■□□□□ 0.22
Hist1h1aP43275 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.43■□□□□ 0.22
Hist1h1aP43275 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Hist1h1aP43275 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.43■□□□□ 0.22
Hist1h1aP43275 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.43■□□□□ 0.22
Hist1h1aP43275 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Hist1h1aP43275 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hist1h1aP43275 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hist1h1aP43275 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hist1h1aP43275 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hist1h1aP43275 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.4■□□□□ 0.22
Hist1h1aP43275 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hist1h1aP43275 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hist1h1aP43275 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hist1h1aP43275 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hist1h1aP43275 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.4■□□□□ 0.22
Hist1h1aP43275 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hist1h1aP43275 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hist1h1aP43275 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hist1h1aP43275 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.39■□□□□ 0.22
Hist1h1aP43275 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Hist1h1aP43275 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist1h1aP43275 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist1h1aP43275 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hist1h1aP43275 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.39■□□□□ 0.21
Hist1h1aP43275 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist1h1aP43275 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist1h1aP43275 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist1h1aP43275 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.39■□□□□ 0.21
Hist1h1aP43275 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hist1h1aP43275 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1aP43275 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1aP43275 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1aP43275 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.37■□□□□ 0.21
Hist1h1aP43275 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1aP43275 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1aP43275 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.37■□□□□ 0.21
Hist1h1aP43275 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1aP43275 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms