Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LdlrP35951 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LdlrP35951 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LdlrP35951 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LdlrP35951 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.9■□□□□ 0.78
LdlrP35951 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LdlrP35951 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LdlrP35951 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LdlrP35951 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.89■□□□□ 0.78
LdlrP35951 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LdlrP35951 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LdlrP35951 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LdlrP35951 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LdlrP35951 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.89■□□□□ 0.77
LdlrP35951 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.89■□□□□ 0.77
LdlrP35951 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LdlrP35951 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LdlrP35951 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LdlrP35951 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LdlrP35951 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LdlrP35951 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LdlrP35951 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LdlrP35951 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LdlrP35951 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LdlrP35951 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LdlrP35951 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LdlrP35951 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LdlrP35951 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LdlrP35951 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LdlrP35951 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LdlrP35951 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LdlrP35951 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LdlrP35951 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.87■□□□□ 0.77
LdlrP35951 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LdlrP35951 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LdlrP35951 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LdlrP35951 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
LdlrP35951 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LdlrP35951 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LdlrP35951 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LdlrP35951 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LdlrP35951 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.86■□□□□ 0.77
LdlrP35951 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LdlrP35951 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LdlrP35951 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LdlrP35951 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.86■□□□□ 0.77
LdlrP35951 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LdlrP35951 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LdlrP35951 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.85■□□□□ 0.77
LdlrP35951 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LdlrP35951 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LdlrP35951 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.85■□□□□ 0.77
LdlrP35951 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LdlrP35951 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LdlrP35951 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LdlrP35951 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
LdlrP35951 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LdlrP35951 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.84■□□□□ 0.77
LdlrP35951 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LdlrP35951 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.84■□□□□ 0.77
LdlrP35951 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LdlrP35951 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LdlrP35951 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LdlrP35951 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LdlrP35951 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LdlrP35951 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LdlrP35951 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
LdlrP35951 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LdlrP35951 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LdlrP35951 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.83■□□□□ 0.77
LdlrP35951 Gm9847-201ENSMUST00000052528 599 ntBASIC19.83■□□□□ 0.77
LdlrP35951 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LdlrP35951 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LdlrP35951 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
LdlrP35951 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
LdlrP35951 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LdlrP35951 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LdlrP35951 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LdlrP35951 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LdlrP35951 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LdlrP35951 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LdlrP35951 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LdlrP35951 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LdlrP35951 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LdlrP35951 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LdlrP35951 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LdlrP35951 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LdlrP35951 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LdlrP35951 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LdlrP35951 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LdlrP35951 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LdlrP35951 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LdlrP35951 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.8■□□□□ 0.76
LdlrP35951 Gm21956-201ENSMUST00000179946 522 ntBASIC19.8■□□□□ 0.76
LdlrP35951 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.8■□□□□ 0.76
LdlrP35951 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LdlrP35951 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.8■□□□□ 0.76
LdlrP35951 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LdlrP35951 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LdlrP35951 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms