Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hes1P35428 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hes1P35428 Gm22238-201ENSMUST00000175222 88 ntBASIC16.43■□□□□ 0.22
Hes1P35428 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.43■□□□□ 0.22
Hes1P35428 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hes1P35428 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hes1P35428 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hes1P35428 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hes1P35428 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hes1P35428 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hes1P35428 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hes1P35428 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hes1P35428 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hes1P35428 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.42■□□□□ 0.22
Hes1P35428 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hes1P35428 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hes1P35428 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hes1P35428 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hes1P35428 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hes1P35428 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.42■□□□□ 0.22
Hes1P35428 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hes1P35428 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.42■□□□□ 0.22
Hes1P35428 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hes1P35428 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hes1P35428 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hes1P35428 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hes1P35428 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hes1P35428 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hes1P35428 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hes1P35428 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hes1P35428 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hes1P35428 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hes1P35428 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.41■□□□□ 0.22
Hes1P35428 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hes1P35428 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Hes1P35428 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Hes1P35428 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.41■□□□□ 0.22
Hes1P35428 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hes1P35428 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hes1P35428 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hes1P35428 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.41■□□□□ 0.22
Hes1P35428 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hes1P35428 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hes1P35428 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hes1P35428 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hes1P35428 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hes1P35428 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hes1P35428 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.4■□□□□ 0.22
Hes1P35428 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.4■□□□□ 0.22
Hes1P35428 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.4■□□□□ 0.22
Hes1P35428 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hes1P35428 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hes1P35428 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hes1P35428 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Hes1P35428 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.4■□□□□ 0.22
Hes1P35428 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hes1P35428 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hes1P35428 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hes1P35428 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hes1P35428 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hes1P35428 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hes1P35428 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hes1P35428 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hes1P35428 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hes1P35428 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hes1P35428 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
Hes1P35428 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hes1P35428 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.38■□□□□ 0.21
Hes1P35428 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.38■□□□□ 0.21
Hes1P35428 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.38■□□□□ 0.21
Hes1P35428 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hes1P35428 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hes1P35428 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hes1P35428 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hes1P35428 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hes1P35428 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hes1P35428 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hes1P35428 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hes1P35428 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hes1P35428 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Hes1P35428 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.37■□□□□ 0.21
Hes1P35428 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hes1P35428 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Hes1P35428 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hes1P35428 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hes1P35428 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hes1P35428 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hes1P35428 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hes1P35428 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hes1P35428 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hes1P35428 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hes1P35428 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.36■□□□□ 0.21
Hes1P35428 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hes1P35428 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
Hes1P35428 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hes1P35428 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.36■□□□□ 0.21
Hes1P35428 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.36■□□□□ 0.21
Hes1P35428 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hes1P35428 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hes1P35428 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms