Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp13P33435 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.48■□□□□ 0.87
Mmp13P33435 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.48■□□□□ 0.87
Mmp13P33435 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp13P33435 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp13P33435 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp13P33435 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp13P33435 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp13P33435 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp13P33435 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp13P33435 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Mmp13P33435 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Mmp13P33435 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.47■□□□□ 0.87
Mmp13P33435 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.47■□□□□ 0.87
Mmp13P33435 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Mmp13P33435 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp13P33435 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp13P33435 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp13P33435 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp13P33435 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp13P33435 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.46■□□□□ 0.87
Mmp13P33435 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.46■□□□□ 0.87
Mmp13P33435 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp13P33435 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp13P33435 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp13P33435 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp13P33435 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp13P33435 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Mmp13P33435 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.45■□□□□ 0.86
Mmp13P33435 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp13P33435 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Mmp13P33435 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp13P33435 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp13P33435 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp13P33435 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.45■□□□□ 0.86
Mmp13P33435 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp13P33435 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp13P33435 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp13P33435 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp13P33435 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp13P33435 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.43■□□□□ 0.86
Mmp13P33435 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.43■□□□□ 0.86
Mmp13P33435 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp13P33435 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp13P33435 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp13P33435 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp13P33435 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.42■□□□□ 0.86
Mmp13P33435 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp13P33435 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.42■□□□□ 0.86
Mmp13P33435 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Mmp13P33435 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp13P33435 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Mmp13P33435 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp13P33435 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Mmp13P33435 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp13P33435 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp13P33435 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp13P33435 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp13P33435 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp13P33435 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp13P33435 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Mmp13P33435 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp13P33435 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp13P33435 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp13P33435 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp13P33435 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp13P33435 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp13P33435 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp13P33435 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.4■□□□□ 0.86
Mmp13P33435 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp13P33435 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.4■□□□□ 0.86
Mmp13P33435 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp13P33435 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp13P33435 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Mmp13P33435 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mmp13P33435 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.39■□□□□ 0.86
Mmp13P33435 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mmp13P33435 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp13P33435 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp13P33435 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp13P33435 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Mmp13P33435 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp13P33435 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp13P33435 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp13P33435 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp13P33435 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.38■□□□□ 0.85
Mmp13P33435 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.38■□□□□ 0.85
Mmp13P33435 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.38■□□□□ 0.85
Mmp13P33435 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.38■□□□□ 0.85
Mmp13P33435 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.38■□□□□ 0.85
Mmp13P33435 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.38■□□□□ 0.85
Mmp13P33435 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Mmp13P33435 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Mmp13P33435 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Mmp13P33435 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp13P33435 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp13P33435 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp13P33435 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp13P33435 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp13P33435 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms