Protein–RNA interactions for Protein: P29352

Ptpn22, Tyrosine-protein phosphatase non-receptor type 22, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn22P29352 Gm20049-201ENSMUST00000219950 730 ntBASIC21.36■■□□□ 1.01
Ptpn22P29352 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptpn22P29352 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptpn22P29352 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptpn22P29352 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptpn22P29352 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.35■■□□□ 1.01
Ptpn22P29352 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.35■■□□□ 1.01
Ptpn22P29352 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.35■■□□□ 1.01
Ptpn22P29352 Gm5408-201ENSMUST00000197998 747 ntBASIC21.35■■□□□ 1.01
Ptpn22P29352 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptpn22P29352 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptpn22P29352 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptpn22P29352 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptpn22P29352 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptpn22P29352 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptpn22P29352 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpn22P29352 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpn22P29352 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpn22P29352 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.34■■□□□ 1.01
Ptpn22P29352 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpn22P29352 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ptpn22P29352 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpn22P29352 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptpn22P29352 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ptpn22P29352 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptpn22P29352 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptpn22P29352 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptpn22P29352 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptpn22P29352 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptpn22P29352 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ptpn22P29352 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ptpn22P29352 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ptpn22P29352 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ptpn22P29352 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.32■■□□□ 1
Ptpn22P29352 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ptpn22P29352 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ptpn22P29352 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Ptpn22P29352 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ptpn22P29352 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ptpn22P29352 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ptpn22P29352 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ptpn22P29352 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ptpn22P29352 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.31■■□□□ 1
Ptpn22P29352 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptpn22P29352 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ptpn22P29352 Gm7290-201ENSMUST00000104990 617 ntBASIC21.31■■□□□ 1
Ptpn22P29352 Gm13148-201ENSMUST00000118892 745 ntBASIC21.31■■□□□ 1
Ptpn22P29352 Gm12918-201ENSMUST00000120234 636 ntBASIC21.31■■□□□ 1
Ptpn22P29352 Gm15710-201ENSMUST00000121821 636 ntBASIC21.31■■□□□ 1
Ptpn22P29352 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ptpn22P29352 Gm5075-201ENSMUST00000196916 622 ntBASIC21.31■■□□□ 1
Ptpn22P29352 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.31■■□□□ 1
Ptpn22P29352 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.31■■□□□ 1
Ptpn22P29352 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ptpn22P29352 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ptpn22P29352 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptpn22P29352 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptpn22P29352 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ptpn22P29352 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ptpn22P29352 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ptpn22P29352 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ptpn22P29352 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ptpn22P29352 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ptpn22P29352 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Ptpn22P29352 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ptpn22P29352 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.3■■□□□ 1
Ptpn22P29352 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptpn22P29352 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ptpn22P29352 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ptpn22P29352 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ptpn22P29352 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ptpn22P29352 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ptpn22P29352 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Ptpn22P29352 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.29■■□□□ 1
Ptpn22P29352 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ptpn22P29352 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Ptpn22P29352 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ptpn22P29352 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ptpn22P29352 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptpn22P29352 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ptpn22P29352 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ptpn22P29352 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.28■■□□□ 1
Ptpn22P29352 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.28■■□□□ 1
Ptpn22P29352 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ptpn22P29352 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ptpn22P29352 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptpn22P29352 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ptpn22P29352 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ptpn22P29352 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ptpn22P29352 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.27■■□□□ 1
Ptpn22P29352 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ptpn22P29352 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ptpn22P29352 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ptpn22P29352 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ptpn22P29352 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.26■□□□□ 0.99
Ptpn22P29352 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.26■□□□□ 0.99
Ptpn22P29352 Gm37856-201ENSMUST00000191634 999 ntBASIC21.26■□□□□ 0.99
Ptpn22P29352 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
Ptpn22P29352 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptpn22P29352 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms