Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
Nckap1P28660 Gm40848-201ENSMUST00000221998 324 ntBASIC19.94■□□□□ 0.78
Nckap1P28660 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nckap1P28660 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nckap1P28660 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nckap1P28660 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nckap1P28660 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nckap1P28660 Smad6-203ENSMUST00000179458 273 ntBASIC19.93■□□□□ 0.78
Nckap1P28660 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.93■□□□□ 0.78
Nckap1P28660 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nckap1P28660 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nckap1P28660 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nckap1P28660 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nckap1P28660 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.92■□□□□ 0.78
Nckap1P28660 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.92■□□□□ 0.78
Nckap1P28660 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nckap1P28660 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nckap1P28660 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Nckap1P28660 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nckap1P28660 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nckap1P28660 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nckap1P28660 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nckap1P28660 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nckap1P28660 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.92■□□□□ 0.78
Nckap1P28660 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nckap1P28660 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Nckap1P28660 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nckap1P28660 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nckap1P28660 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nckap1P28660 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nckap1P28660 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nckap1P28660 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nckap1P28660 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.91■□□□□ 0.78
Nckap1P28660 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nckap1P28660 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.91■□□□□ 0.78
Nckap1P28660 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.91■□□□□ 0.78
Nckap1P28660 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nckap1P28660 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nckap1P28660 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nckap1P28660 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nckap1P28660 Gm10493-201ENSMUST00000097270 612 ntBASIC19.9■□□□□ 0.78
Nckap1P28660 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Nckap1P28660 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nckap1P28660 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nckap1P28660 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nckap1P28660 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nckap1P28660 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.9■□□□□ 0.78
Nckap1P28660 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nckap1P28660 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nckap1P28660 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nckap1P28660 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nckap1P28660 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nckap1P28660 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nckap1P28660 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.88■□□□□ 0.77
Nckap1P28660 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
Nckap1P28660 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nckap1P28660 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Nckap1P28660 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nckap1P28660 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nckap1P28660 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nckap1P28660 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nckap1P28660 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nckap1P28660 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nckap1P28660 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Nckap1P28660 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nckap1P28660 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nckap1P28660 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nckap1P28660 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nckap1P28660 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.87■□□□□ 0.77
Nckap1P28660 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nckap1P28660 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nckap1P28660 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.87■□□□□ 0.77
Nckap1P28660 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nckap1P28660 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nckap1P28660 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nckap1P28660 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nckap1P28660 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nckap1P28660 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nckap1P28660 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.85■□□□□ 0.77
Nckap1P28660 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nckap1P28660 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.85■□□□□ 0.77
Nckap1P28660 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nckap1P28660 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.85■□□□□ 0.77
Nckap1P28660 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.85■□□□□ 0.77
Nckap1P28660 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nckap1P28660 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Nckap1P28660 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nckap1P28660 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nckap1P28660 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.84■□□□□ 0.77
Nckap1P28660 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nckap1P28660 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Nckap1P28660 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nckap1P28660 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.84■□□□□ 0.77
Nckap1P28660 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nckap1P28660 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nckap1P28660 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nckap1P28660 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nckap1P28660 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nckap1P28660 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
Nckap1P28660 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms