Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.34■□□□□ 0.53
Cd40lgP27548 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cd40lgP27548 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cd40lgP27548 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd40lgP27548 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cd40lgP27548 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd40lgP27548 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd40lgP27548 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd40lgP27548 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd40lgP27548 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.33■□□□□ 0.53
Cd40lgP27548 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.33■□□□□ 0.52
Cd40lgP27548 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.33■□□□□ 0.52
Cd40lgP27548 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cd40lgP27548 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd40lgP27548 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
Cd40lgP27548 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40lgP27548 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40lgP27548 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40lgP27548 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40lgP27548 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40lgP27548 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40lgP27548 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40lgP27548 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.32■□□□□ 0.52
Cd40lgP27548 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40lgP27548 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40lgP27548 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.32■□□□□ 0.52
Cd40lgP27548 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.32■□□□□ 0.52
Cd40lgP27548 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.32■□□□□ 0.52
Cd40lgP27548 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40lgP27548 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40lgP27548 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40lgP27548 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40lgP27548 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cd40lgP27548 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40lgP27548 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40lgP27548 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40lgP27548 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40lgP27548 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40lgP27548 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.31■□□□□ 0.52
Cd40lgP27548 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Cd40lgP27548 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40lgP27548 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cd40lgP27548 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cd40lgP27548 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40lgP27548 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40lgP27548 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40lgP27548 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.3■□□□□ 0.52
Cd40lgP27548 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.3■□□□□ 0.52
Cd40lgP27548 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40lgP27548 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40lgP27548 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cd40lgP27548 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40lgP27548 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40lgP27548 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40lgP27548 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.29■□□□□ 0.52
Cd40lgP27548 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.29■□□□□ 0.52
Cd40lgP27548 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40lgP27548 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Cd40lgP27548 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40lgP27548 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40lgP27548 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40lgP27548 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40lgP27548 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40lgP27548 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40lgP27548 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40lgP27548 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40lgP27548 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40lgP27548 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cd40lgP27548 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40lgP27548 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40lgP27548 Gm12821-201ENSMUST00000120022 600 ntBASIC18.28■□□□□ 0.52
Cd40lgP27548 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40lgP27548 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Cd40lgP27548 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.28■□□□□ 0.52
Cd40lgP27548 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40lgP27548 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.28■□□□□ 0.52
Cd40lgP27548 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40lgP27548 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.28■□□□□ 0.52
Cd40lgP27548 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40lgP27548 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cd40lgP27548 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd40lgP27548 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd40lgP27548 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.27■□□□□ 0.52
Cd40lgP27548 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cd40lgP27548 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.27■□□□□ 0.52
Cd40lgP27548 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cd40lgP27548 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Cd40lgP27548 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cd40lgP27548 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cd40lgP27548 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cd40lgP27548 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40lgP27548 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40lgP27548 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40lgP27548 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.26■□□□□ 0.51
Cd40lgP27548 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.26■□□□□ 0.51
Cd40lgP27548 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40lgP27548 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40lgP27548 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd40lgP27548 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.25■□□□□ 0.51
Cd40lgP27548 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms