Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pde6bP23440 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pde6bP23440 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pde6bP23440 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.76■■□□□ 1.07
Pde6bP23440 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pde6bP23440 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pde6bP23440 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pde6bP23440 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pde6bP23440 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pde6bP23440 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pde6bP23440 Gm40848-201ENSMUST00000221998 324 ntBASIC21.75■■□□□ 1.07
Pde6bP23440 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
Pde6bP23440 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pde6bP23440 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pde6bP23440 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pde6bP23440 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pde6bP23440 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pde6bP23440 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pde6bP23440 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.74■■□□□ 1.07
Pde6bP23440 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.74■■□□□ 1.07
Pde6bP23440 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pde6bP23440 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.74■■□□□ 1.07
Pde6bP23440 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pde6bP23440 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pde6bP23440 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.73■■□□□ 1.07
Pde6bP23440 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pde6bP23440 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pde6bP23440 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.73■■□□□ 1.07
Pde6bP23440 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.73■■□□□ 1.07
Pde6bP23440 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pde6bP23440 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pde6bP23440 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pde6bP23440 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pde6bP23440 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pde6bP23440 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.72■■□□□ 1.07
Pde6bP23440 Smad6-203ENSMUST00000179458 273 ntBASIC21.72■■□□□ 1.07
Pde6bP23440 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Pde6bP23440 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pde6bP23440 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.71■■□□□ 1.07
Pde6bP23440 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pde6bP23440 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pde6bP23440 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
Pde6bP23440 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pde6bP23440 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pde6bP23440 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
Pde6bP23440 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pde6bP23440 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.71■■□□□ 1.07
Pde6bP23440 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pde6bP23440 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pde6bP23440 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pde6bP23440 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pde6bP23440 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.7■■□□□ 1.06
Pde6bP23440 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.7■■□□□ 1.06
Pde6bP23440 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pde6bP23440 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.7■■□□□ 1.06
Pde6bP23440 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pde6bP23440 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pde6bP23440 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pde6bP23440 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pde6bP23440 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pde6bP23440 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pde6bP23440 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.69■■□□□ 1.06
Pde6bP23440 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pde6bP23440 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pde6bP23440 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.69■■□□□ 1.06
Pde6bP23440 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pde6bP23440 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pde6bP23440 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.69■■□□□ 1.06
Pde6bP23440 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pde6bP23440 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pde6bP23440 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pde6bP23440 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pde6bP23440 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pde6bP23440 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pde6bP23440 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pde6bP23440 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.68■■□□□ 1.06
Pde6bP23440 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.68■■□□□ 1.06
Pde6bP23440 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.68■■□□□ 1.06
Pde6bP23440 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.68■■□□□ 1.06
Pde6bP23440 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.68■■□□□ 1.06
Pde6bP23440 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pde6bP23440 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pde6bP23440 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.68■■□□□ 1.06
Pde6bP23440 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pde6bP23440 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.68■■□□□ 1.06
Pde6bP23440 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pde6bP23440 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Pde6bP23440 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pde6bP23440 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
Pde6bP23440 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pde6bP23440 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Pde6bP23440 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
Pde6bP23440 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pde6bP23440 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pde6bP23440 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.67■■□□□ 1.06
Pde6bP23440 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Pde6bP23440 Gm29257-201ENSMUST00000186115 639 ntBASIC21.67■■□□□ 1.06
Pde6bP23440 Gm7291-201ENSMUST00000199147 382 ntBASIC21.67■■□□□ 1.06
Pde6bP23440 Gm42642-201ENSMUST00000200683 355 ntBASIC21.67■■□□□ 1.06
Pde6bP23440 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms