Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Tnfrsf9P20334 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf9P20334 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf9P20334 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf9P20334 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf9P20334 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.11■□□□□ 0.17
Tnfrsf9P20334 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.11■□□□□ 0.17
Tnfrsf9P20334 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf9P20334 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Tnfrsf9P20334 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.11■□□□□ 0.17
Tnfrsf9P20334 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf9P20334 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf9P20334 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf9P20334 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
Tnfrsf9P20334 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf9P20334 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf9P20334 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf9P20334 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf9P20334 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf9P20334 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.08■□□□□ 0.16
Tnfrsf9P20334 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf9P20334 Gm43173-201ENSMUST00000202246 593 ntBASIC16.08■□□□□ 0.16
Tnfrsf9P20334 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.08■□□□□ 0.16
Tnfrsf9P20334 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf9P20334 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.08■□□□□ 0.16
Tnfrsf9P20334 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf9P20334 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.08■□□□□ 0.16
Tnfrsf9P20334 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf9P20334 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 Gm27011-201ENSMUST00000182352 972 ntBASIC16.07■□□□□ 0.16
Tnfrsf9P20334 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf9P20334 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms