Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx1P18111 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cdx1P18111 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx1P18111 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx1P18111 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx1P18111 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx1P18111 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx1P18111 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdx1P18111 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx1P18111 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.96■□□□□ 0.15
Cdx1P18111 Rarb-207ENSMUST00000225921 2756 ntBASIC15.96■□□□□ 0.15
Cdx1P18111 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx1P18111 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.96■□□□□ 0.15
Cdx1P18111 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.96■□□□□ 0.15
Cdx1P18111 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx1P18111 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx1P18111 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx1P18111 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx1P18111 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx1P18111 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx1P18111 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdx1P18111 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdx1P18111 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx1P18111 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx1P18111 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx1P18111 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.95■□□□□ 0.14
Cdx1P18111 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx1P18111 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx1P18111 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx1P18111 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx1P18111 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx1P18111 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cdx1P18111 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Cdx1P18111 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx1P18111 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.95■□□□□ 0.14
Cdx1P18111 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.95■□□□□ 0.14
Cdx1P18111 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdx1P18111 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx1P18111 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx1P18111 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.94■□□□□ 0.14
Cdx1P18111 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx1P18111 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx1P18111 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx1P18111 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx1P18111 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx1P18111 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx1P18111 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx1P18111 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx1P18111 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx1P18111 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.94■□□□□ 0.14
Cdx1P18111 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdx1P18111 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cdx1P18111 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Cdx1P18111 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cdx1P18111 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdx1P18111 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cdx1P18111 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Cdx1P18111 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdx1P18111 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdx1P18111 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdx1P18111 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.93■□□□□ 0.14
Cdx1P18111 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdx1P18111 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cdx1P18111 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdx1P18111 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Cdx1P18111 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdx1P18111 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdx1P18111 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cdx1P18111 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdx1P18111 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdx1P18111 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdx1P18111 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdx1P18111 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Cdx1P18111 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.92■□□□□ 0.14
Cdx1P18111 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.92■□□□□ 0.14
Cdx1P18111 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdx1P18111 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.92■□□□□ 0.14
Cdx1P18111 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdx1P18111 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdx1P18111 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdx1P18111 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdx1P18111 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdx1P18111 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Cdx1P18111 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdx1P18111 Golph3-205ENSMUST00000228671 2842 ntBASIC15.91■□□□□ 0.14
Cdx1P18111 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cdx1P18111 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdx1P18111 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdx1P18111 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdx1P18111 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdx1P18111 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cdx1P18111 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdx1P18111 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cdx1P18111 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdx1P18111 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdx1P18111 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cdx1P18111 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx1P18111 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cdx1P18111 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx1P18111 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms