Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmga1P17095 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmga1P17095 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmga1P17095 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmga1P17095 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmga1P17095 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmga1P17095 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hmga1P17095 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Hmga1P17095 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hmga1P17095 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.64■□□□□ 0.89
Hmga1P17095 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Hmga1P17095 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Hmga1P17095 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmga1P17095 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmga1P17095 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.63■□□□□ 0.89
Hmga1P17095 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmga1P17095 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Hmga1P17095 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmga1P17095 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmga1P17095 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Hmga1P17095 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.63■□□□□ 0.89
Hmga1P17095 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hmga1P17095 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Hmga1P17095 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Hmga1P17095 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.62■□□□□ 0.89
Hmga1P17095 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hmga1P17095 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hmga1P17095 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmga1P17095 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmga1P17095 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hmga1P17095 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmga1P17095 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hmga1P17095 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmga1P17095 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Hmga1P17095 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmga1P17095 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.61■□□□□ 0.89
Hmga1P17095 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.61■□□□□ 0.89
Hmga1P17095 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Hmga1P17095 Gm5874-201ENSMUST00000096101 508 ntBASIC20.61■□□□□ 0.89
Hmga1P17095 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmga1P17095 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmga1P17095 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmga1P17095 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmga1P17095 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmga1P17095 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hmga1P17095 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmga1P17095 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Hmga1P17095 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Hmga1P17095 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.6■□□□□ 0.89
Hmga1P17095 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmga1P17095 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hmga1P17095 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmga1P17095 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmga1P17095 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmga1P17095 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.59■□□□□ 0.89
Hmga1P17095 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmga1P17095 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmga1P17095 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hmga1P17095 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmga1P17095 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmga1P17095 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmga1P17095 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Hmga1P17095 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
Hmga1P17095 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hmga1P17095 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmga1P17095 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmga1P17095 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hmga1P17095 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmga1P17095 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Hmga1P17095 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hmga1P17095 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hmga1P17095 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hmga1P17095 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hmga1P17095 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmga1P17095 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmga1P17095 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmga1P17095 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Hmga1P17095 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmga1P17095 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmga1P17095 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmga1P17095 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmga1P17095 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.57■□□□□ 0.88
Hmga1P17095 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmga1P17095 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmga1P17095 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Hmga1P17095 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.57■□□□□ 0.88
Hmga1P17095 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmga1P17095 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmga1P17095 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmga1P17095 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmga1P17095 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.56■□□□□ 0.88
Hmga1P17095 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmga1P17095 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmga1P17095 Gm10493-201ENSMUST00000097270 612 ntBASIC20.56■□□□□ 0.88
Hmga1P17095 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Hmga1P17095 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmga1P17095 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.56■□□□□ 0.88
Hmga1P17095 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.56■□□□□ 0.88
Hmga1P17095 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmga1P17095 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms