Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cd44P15379 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd44P15379 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cd44P15379 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cd44P15379 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd44P15379 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd44P15379 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd44P15379 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd44P15379 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd44P15379 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cd44P15379 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.09■□□□□ 0.97
Cd44P15379 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd44P15379 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd44P15379 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.08■□□□□ 0.97
Cd44P15379 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cd44P15379 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd44P15379 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd44P15379 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd44P15379 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.08■□□□□ 0.97
Cd44P15379 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd44P15379 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cd44P15379 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd44P15379 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Cd44P15379 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.07■□□□□ 0.96
Cd44P15379 Gm10232-201ENSMUST00000089221 720 ntBASIC21.07■□□□□ 0.96
Cd44P15379 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cd44P15379 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd44P15379 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd44P15379 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Cd44P15379 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd44P15379 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.06■□□□□ 0.96
Cd44P15379 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd44P15379 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.06■□□□□ 0.96
Cd44P15379 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd44P15379 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd44P15379 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd44P15379 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd44P15379 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.05■□□□□ 0.96
Cd44P15379 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.05■□□□□ 0.96
Cd44P15379 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd44P15379 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd44P15379 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cd44P15379 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cd44P15379 Gm7143-201ENSMUST00000222811 859 ntBASIC21.05■□□□□ 0.96
Cd44P15379 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cd44P15379 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd44P15379 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd44P15379 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cd44P15379 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd44P15379 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd44P15379 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.04■□□□□ 0.96
Cd44P15379 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.04■□□□□ 0.96
Cd44P15379 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd44P15379 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cd44P15379 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cd44P15379 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cd44P15379 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Cd44P15379 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Cd44P15379 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd44P15379 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.03■□□□□ 0.96
Cd44P15379 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.03■□□□□ 0.96
Cd44P15379 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd44P15379 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.03■□□□□ 0.96
Cd44P15379 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd44P15379 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cd44P15379 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd44P15379 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd44P15379 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd44P15379 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd44P15379 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd44P15379 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd44P15379 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.02■□□□□ 0.96
Cd44P15379 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd44P15379 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd44P15379 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Cd44P15379 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Cd44P15379 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cd44P15379 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cd44P15379 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cd44P15379 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd44P15379 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cd44P15379 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd44P15379 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cd44P15379 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd44P15379 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd44P15379 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.01■□□□□ 0.95
Cd44P15379 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cd44P15379 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd44P15379 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cd44P15379 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cd44P15379 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cd44P15379 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cd44P15379 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.99■□□□□ 0.95
Cd44P15379 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.99■□□□□ 0.95
Cd44P15379 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cd44P15379 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cd44P15379 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cd44P15379 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cd44P15379 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Cd44P15379 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms