Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.06■□□□□ 0.64
Sod1P08228 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sod1P08228 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sod1P08228 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.06■□□□□ 0.64
Sod1P08228 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sod1P08228 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sod1P08228 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sod1P08228 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sod1P08228 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sod1P08228 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Sod1P08228 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.05■□□□□ 0.64
Sod1P08228 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sod1P08228 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.05■□□□□ 0.64
Sod1P08228 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sod1P08228 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.05■□□□□ 0.64
Sod1P08228 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sod1P08228 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.04■□□□□ 0.64
Sod1P08228 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sod1P08228 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sod1P08228 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sod1P08228 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.03■□□□□ 0.64
Sod1P08228 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Sod1P08228 Gm9988-201ENSMUST00000069786 435 ntBASIC19.03■□□□□ 0.64
Sod1P08228 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sod1P08228 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sod1P08228 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sod1P08228 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sod1P08228 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sod1P08228 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sod1P08228 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Sod1P08228 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.02■□□□□ 0.64
Sod1P08228 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sod1P08228 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.02■□□□□ 0.64
Sod1P08228 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sod1P08228 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sod1P08228 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sod1P08228 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sod1P08228 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.01■□□□□ 0.63
Sod1P08228 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sod1P08228 Gm27801-201ENSMUST00000184174 223 ntBASIC19.01■□□□□ 0.63
Sod1P08228 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.01■□□□□ 0.63
Sod1P08228 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.01■□□□□ 0.63
Sod1P08228 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.01■□□□□ 0.63
Sod1P08228 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sod1P08228 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sod1P08228 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sod1P08228 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sod1P08228 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19■□□□□ 0.63
Sod1P08228 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19■□□□□ 0.63
Sod1P08228 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Sod1P08228 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19■□□□□ 0.63
Sod1P08228 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sod1P08228 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sod1P08228 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sod1P08228 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sod1P08228 Gm13234-201ENSMUST00000120010 747 ntBASIC18.99■□□□□ 0.63
Sod1P08228 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Sod1P08228 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sod1P08228 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.99■□□□□ 0.63
Sod1P08228 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sod1P08228 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sod1P08228 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sod1P08228 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sod1P08228 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sod1P08228 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sod1P08228 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sod1P08228 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sod1P08228 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sod1P08228 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sod1P08228 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sod1P08228 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.98■□□□□ 0.63
Sod1P08228 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.98■□□□□ 0.63
Sod1P08228 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sod1P08228 Reep4-203ENSMUST00000226563 1444 ntBASIC18.98■□□□□ 0.63
Sod1P08228 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sod1P08228 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sod1P08228 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sod1P08228 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sod1P08228 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Sod1P08228 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sod1P08228 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sod1P08228 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.97■□□□□ 0.63
Sod1P08228 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.97■□□□□ 0.63
Sod1P08228 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sod1P08228 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.97■□□□□ 0.63
Sod1P08228 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms