Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc1P07903 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc1P07903 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc1P07903 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc1P07903 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc1P07903 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.72■□□□□ 0.27
Ercc1P07903 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc1P07903 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc1P07903 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc1P07903 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.72■□□□□ 0.27
Ercc1P07903 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.72■□□□□ 0.27
Ercc1P07903 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.72■□□□□ 0.27
Ercc1P07903 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc1P07903 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc1P07903 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc1P07903 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ercc1P07903 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.71■□□□□ 0.27
Ercc1P07903 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc1P07903 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc1P07903 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc1P07903 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ercc1P07903 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ercc1P07903 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ercc1P07903 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc1P07903 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ercc1P07903 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc1P07903 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc1P07903 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.7■□□□□ 0.26
Ercc1P07903 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc1P07903 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc1P07903 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc1P07903 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc1P07903 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.7■□□□□ 0.26
Ercc1P07903 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc1P07903 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc1P07903 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc1P07903 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ercc1P07903 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc1P07903 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ercc1P07903 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc1P07903 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc1P07903 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc1P07903 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.69■□□□□ 0.26
Ercc1P07903 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc1P07903 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.69■□□□□ 0.26
Ercc1P07903 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc1P07903 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.68■□□□□ 0.26
Ercc1P07903 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc1P07903 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Ercc1P07903 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc1P07903 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc1P07903 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc1P07903 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc1P07903 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Ercc1P07903 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.68■□□□□ 0.26
Ercc1P07903 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc1P07903 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc1P07903 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc1P07903 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc1P07903 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc1P07903 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc1P07903 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc1P07903 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc1P07903 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc1P07903 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc1P07903 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc1P07903 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc1P07903 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc1P07903 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc1P07903 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc1P07903 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc1P07903 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ercc1P07903 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc1P07903 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc1P07903 Gm10420-201ENSMUST00000121713 882 ntBASIC16.66■□□□□ 0.26
Ercc1P07903 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc1P07903 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc1P07903 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Ercc1P07903 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ercc1P07903 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc1P07903 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc1P07903 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc1P07903 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc1P07903 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.65■□□□□ 0.26
Ercc1P07903 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc1P07903 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc1P07903 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc1P07903 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc1P07903 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc1P07903 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.65■□□□□ 0.26
Ercc1P07903 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc1P07903 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Ercc1P07903 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc1P07903 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc1P07903 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc1P07903 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc1P07903 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc1P07903 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc1P07903 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc1P07903 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 131.6 ms