Protein–RNA interactions for Protein: P06837

Gap43, Neuromodulin, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gap43P06837 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Gap43P06837 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gap43P06837 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Gap43P06837 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gap43P06837 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gap43P06837 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gap43P06837 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gap43P06837 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gap43P06837 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.58■□□□□ 0.89
Gap43P06837 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gap43P06837 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.58■□□□□ 0.88
Gap43P06837 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Gap43P06837 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Gap43P06837 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gap43P06837 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gap43P06837 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gap43P06837 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Gap43P06837 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gap43P06837 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gap43P06837 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gap43P06837 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gap43P06837 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gap43P06837 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gap43P06837 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gap43P06837 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gap43P06837 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Gap43P06837 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gap43P06837 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gap43P06837 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gap43P06837 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gap43P06837 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gap43P06837 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.56■□□□□ 0.88
Gap43P06837 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Gap43P06837 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gap43P06837 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gap43P06837 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gap43P06837 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gap43P06837 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gap43P06837 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gap43P06837 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gap43P06837 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gap43P06837 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gap43P06837 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gap43P06837 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.54■□□□□ 0.88
Gap43P06837 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Gap43P06837 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gap43P06837 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gap43P06837 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gap43P06837 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gap43P06837 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gap43P06837 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gap43P06837 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gap43P06837 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gap43P06837 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gap43P06837 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gap43P06837 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gap43P06837 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gap43P06837 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Gap43P06837 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gap43P06837 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gap43P06837 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gap43P06837 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gap43P06837 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gap43P06837 Gm27502-201ENSMUST00000183495 199 ntBASIC20.52■□□□□ 0.88
Gap43P06837 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.52■□□□□ 0.88
Gap43P06837 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.52■□□□□ 0.88
Gap43P06837 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gap43P06837 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gap43P06837 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gap43P06837 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gap43P06837 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gap43P06837 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.52■□□□□ 0.87
Gap43P06837 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Gap43P06837 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gap43P06837 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gap43P06837 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gap43P06837 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gap43P06837 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gap43P06837 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gap43P06837 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gap43P06837 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Gap43P06837 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gap43P06837 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gap43P06837 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gap43P06837 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gap43P06837 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gap43P06837 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gap43P06837 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gap43P06837 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.49■□□□□ 0.87
Gap43P06837 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gap43P06837 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Gap43P06837 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gap43P06837 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.49■□□□□ 0.87
Gap43P06837 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gap43P06837 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gap43P06837 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gap43P06837 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gap43P06837 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gap43P06837 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.48■□□□□ 0.87
Gap43P06837 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms