Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04213 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
P04213 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04213 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04213 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04213 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04213 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P04213 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04213 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04213 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.27■□□□□ 0.68
P04213 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.27■□□□□ 0.68
P04213 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04213 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04213 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04213 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04213 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.27■□□□□ 0.68
P04213 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.27■□□□□ 0.68
P04213 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.27■□□□□ 0.68
P04213 Gm9870-201ENSMUST00000063874 645 ntBASIC19.27■□□□□ 0.68
P04213 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04213 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P04213 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
P04213 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04213 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04213 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P04213 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04213 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.26■□□□□ 0.67
P04213 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04213 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.25■□□□□ 0.67
P04213 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04213 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.25■□□□□ 0.67
P04213 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.25■□□□□ 0.67
P04213 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P04213 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
P04213 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04213 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04213 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04213 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P04213 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04213 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04213 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04213 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P04213 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04213 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04213 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P04213 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04213 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04213 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
P04213 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.23■□□□□ 0.67
P04213 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P04213 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P04213 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
P04213 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
P04213 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P04213 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04213 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04213 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04213 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04213 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04213 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04213 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04213 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04213 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
P04213 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
P04213 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
P04213 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04213 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04213 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P04213 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P04213 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.21■□□□□ 0.67
P04213 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.21■□□□□ 0.67
P04213 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.21■□□□□ 0.67
P04213 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.21■□□□□ 0.67
P04213 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P04213 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
P04213 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
P04213 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
P04213 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
P04213 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P04213 Iqck-206ENSMUST00000208658 2891 ntBASIC19.2■□□□□ 0.66
P04213 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
P04213 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P04213 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P04213 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P04213 Gm43530-201ENSMUST00000195920 274 ntBASIC19.2■□□□□ 0.66
P04213 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P04213 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.2■□□□□ 0.66
P04213 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
P04213 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
P04213 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P04213 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P04213 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P04213 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P04213 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P04213 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P04213 Gm22238-201ENSMUST00000175222 88 ntBASIC19.19■□□□□ 0.66
P04213 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.19■□□□□ 0.66
P04213 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P04213 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P04213 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms