Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01852 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
P01852 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01852 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
P01852 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.25■□□□□ 0.51
P01852 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01852 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01852 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P01852 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
P01852 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.24■□□□□ 0.51
P01852 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.24■□□□□ 0.51
P01852 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
P01852 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01852 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01852 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01852 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01852 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
P01852 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
P01852 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01852 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01852 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01852 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01852 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
P01852 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01852 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01852 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01852 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01852 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
P01852 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.22■□□□□ 0.51
P01852 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
P01852 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
P01852 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01852 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.22■□□□□ 0.51
P01852 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
P01852 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
P01852 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
P01852 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P01852 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P01852 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.21■□□□□ 0.51
P01852 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.21■□□□□ 0.51
P01852 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P01852 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
P01852 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P01852 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P01852 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
P01852 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01852 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01852 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01852 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01852 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.2■□□□□ 0.5
P01852 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01852 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
P01852 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P01852 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01852 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.2■□□□□ 0.5
P01852 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P01852 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P01852 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01852 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
P01852 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P01852 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
P01852 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P01852 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P01852 Gm27454-201ENSMUST00000185090 204 ntBASIC18.19■□□□□ 0.5
P01852 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P01852 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P01852 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P01852 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P01852 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
P01852 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
P01852 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P01852 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P01852 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P01852 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
P01852 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P01852 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
P01852 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P01852 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P01852 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
P01852 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.17■□□□□ 0.5
P01852 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
P01852 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
P01852 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
P01852 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.17■□□□□ 0.5
P01852 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
P01852 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.17■□□□□ 0.5
P01852 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms