Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TcraP01849 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TcraP01849 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
TcraP01849 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TcraP01849 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.55□□□□□ -0.08
TcraP01849 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TcraP01849 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TcraP01849 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TcraP01849 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TcraP01849 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TcraP01849 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TcraP01849 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
TcraP01849 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TcraP01849 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TcraP01849 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TcraP01849 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.54□□□□□ -0.08
TcraP01849 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.54□□□□□ -0.08
TcraP01849 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.54□□□□□ -0.08
TcraP01849 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
TcraP01849 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TcraP01849 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TcraP01849 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TcraP01849 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TcraP01849 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TcraP01849 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TcraP01849 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.53□□□□□ -0.08
TcraP01849 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TcraP01849 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TcraP01849 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TcraP01849 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TcraP01849 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TcraP01849 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TcraP01849 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TcraP01849 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.53□□□□□ -0.08
TcraP01849 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TcraP01849 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TcraP01849 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TcraP01849 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TcraP01849 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TcraP01849 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TcraP01849 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TcraP01849 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TcraP01849 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TcraP01849 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.52□□□□□ -0.09
TcraP01849 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TcraP01849 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TcraP01849 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TcraP01849 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TcraP01849 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TcraP01849 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TcraP01849 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TcraP01849 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TcraP01849 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TcraP01849 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.51□□□□□ -0.09
TcraP01849 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TcraP01849 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TcraP01849 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TcraP01849 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.51□□□□□ -0.09
TcraP01849 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TcraP01849 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TcraP01849 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TcraP01849 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.5□□□□□ -0.09
TcraP01849 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.5□□□□□ -0.09
TcraP01849 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TcraP01849 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TcraP01849 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms