Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CcnkO88874 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnkO88874 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnkO88874 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnkO88874 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CcnkO88874 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CcnkO88874 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnkO88874 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.62■□□□□ 0.41
CcnkO88874 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnkO88874 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnkO88874 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnkO88874 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnkO88874 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnkO88874 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.62■□□□□ 0.41
CcnkO88874 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CcnkO88874 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CcnkO88874 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CcnkO88874 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnkO88874 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
CcnkO88874 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.61■□□□□ 0.41
CcnkO88874 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnkO88874 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnkO88874 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnkO88874 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.61■□□□□ 0.41
CcnkO88874 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnkO88874 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.61■□□□□ 0.41
CcnkO88874 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnkO88874 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnkO88874 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.61■□□□□ 0.41
CcnkO88874 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnkO88874 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CcnkO88874 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CcnkO88874 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnkO88874 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.6■□□□□ 0.41
CcnkO88874 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnkO88874 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnkO88874 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CcnkO88874 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CcnkO88874 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnkO88874 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnkO88874 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CcnkO88874 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnkO88874 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CcnkO88874 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CcnkO88874 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CcnkO88874 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CcnkO88874 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnkO88874 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CcnkO88874 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnkO88874 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CcnkO88874 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnkO88874 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
CcnkO88874 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CcnkO88874 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnkO88874 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnkO88874 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CcnkO88874 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CcnkO88874 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.58■□□□□ 0.4
CcnkO88874 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
CcnkO88874 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnkO88874 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnkO88874 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnkO88874 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnkO88874 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnkO88874 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
CcnkO88874 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnkO88874 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnkO88874 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnkO88874 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CcnkO88874 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnkO88874 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CcnkO88874 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.57■□□□□ 0.4
CcnkO88874 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnkO88874 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CcnkO88874 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnkO88874 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnkO88874 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CcnkO88874 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CcnkO88874 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CcnkO88874 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnkO88874 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnkO88874 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CcnkO88874 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnkO88874 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CcnkO88874 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.57■□□□□ 0.4
CcnkO88874 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnkO88874 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnkO88874 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnkO88874 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CcnkO88874 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnkO88874 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CcnkO88874 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnkO88874 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CcnkO88874 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CcnkO88874 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnkO88874 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CcnkO88874 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnkO88874 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CcnkO88874 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnkO88874 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms