Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShdO88834 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ShdO88834 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ShdO88834 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
ShdO88834 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShdO88834 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ShdO88834 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ShdO88834 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.48■□□□□ 0.87
ShdO88834 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ShdO88834 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
ShdO88834 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ShdO88834 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ShdO88834 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ShdO88834 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShdO88834 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShdO88834 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ShdO88834 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShdO88834 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.47■□□□□ 0.87
ShdO88834 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.47■□□□□ 0.87
ShdO88834 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShdO88834 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShdO88834 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShdO88834 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShdO88834 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.46■□□□□ 0.87
ShdO88834 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ShdO88834 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.46■□□□□ 0.87
ShdO88834 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ShdO88834 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ShdO88834 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.46■□□□□ 0.87
ShdO88834 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ShdO88834 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ShdO88834 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ShdO88834 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.45■□□□□ 0.86
ShdO88834 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ShdO88834 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ShdO88834 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.45■□□□□ 0.86
ShdO88834 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ShdO88834 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ShdO88834 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ShdO88834 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.45■□□□□ 0.86
ShdO88834 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ShdO88834 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ShdO88834 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShdO88834 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShdO88834 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
ShdO88834 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShdO88834 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShdO88834 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.44■□□□□ 0.86
ShdO88834 Golgb1-201ENSMUST00000023534 498 ntBASIC20.44■□□□□ 0.86
ShdO88834 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShdO88834 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.44■□□□□ 0.86
ShdO88834 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShdO88834 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShdO88834 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ShdO88834 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShdO88834 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShdO88834 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ShdO88834 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShdO88834 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShdO88834 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ShdO88834 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShdO88834 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ShdO88834 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShdO88834 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShdO88834 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ShdO88834 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
ShdO88834 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShdO88834 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShdO88834 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ShdO88834 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ShdO88834 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ShdO88834 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ShdO88834 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ShdO88834 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ShdO88834 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShdO88834 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShdO88834 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ShdO88834 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShdO88834 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ShdO88834 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.41■□□□□ 0.86
ShdO88834 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShdO88834 Gm9847-201ENSMUST00000052528 599 ntBASIC20.41■□□□□ 0.86
ShdO88834 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShdO88834 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShdO88834 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ShdO88834 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShdO88834 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShdO88834 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShdO88834 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.4■□□□□ 0.86
ShdO88834 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ShdO88834 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ShdO88834 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.4■□□□□ 0.86
ShdO88834 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.4■□□□□ 0.86
ShdO88834 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ShdO88834 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.4■□□□□ 0.86
ShdO88834 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ShdO88834 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ShdO88834 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ShdO88834 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ShdO88834 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms