Protein–RNA interactions for Protein: O88809

Dcx, Neuronal migration protein doublecortin, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DcxO88809 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DcxO88809 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DcxO88809 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DcxO88809 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DcxO88809 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DcxO88809 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DcxO88809 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DcxO88809 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DcxO88809 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DcxO88809 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DcxO88809 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.83■■□□□ 1.09
DcxO88809 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
DcxO88809 Gm12527-201ENSMUST00000117967 564 ntBASIC21.83■■□□□ 1.09
DcxO88809 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.83■■□□□ 1.09
DcxO88809 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.83■■□□□ 1.09
DcxO88809 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DcxO88809 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
DcxO88809 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.83■■□□□ 1.09
DcxO88809 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DcxO88809 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
DcxO88809 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
DcxO88809 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.83■■□□□ 1.08
DcxO88809 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.82■■□□□ 1.08
DcxO88809 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DcxO88809 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DcxO88809 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
DcxO88809 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
DcxO88809 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.82■■□□□ 1.08
DcxO88809 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.82■■□□□ 1.08
DcxO88809 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DcxO88809 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DcxO88809 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DcxO88809 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
DcxO88809 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
DcxO88809 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DcxO88809 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DcxO88809 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DcxO88809 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DcxO88809 Gm7514-201ENSMUST00000209475 934 ntBASIC21.81■■□□□ 1.08
DcxO88809 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
DcxO88809 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DcxO88809 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
DcxO88809 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.8■■□□□ 1.08
DcxO88809 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
DcxO88809 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
DcxO88809 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DcxO88809 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.8■■□□□ 1.08
DcxO88809 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
DcxO88809 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
DcxO88809 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.79■■□□□ 1.08
DcxO88809 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
DcxO88809 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DcxO88809 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.79■■□□□ 1.08
DcxO88809 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DcxO88809 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.79■■□□□ 1.08
DcxO88809 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
DcxO88809 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DcxO88809 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
DcxO88809 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DcxO88809 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DcxO88809 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DcxO88809 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
DcxO88809 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
DcxO88809 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DcxO88809 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DcxO88809 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DcxO88809 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DcxO88809 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DcxO88809 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
DcxO88809 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.77■■□□□ 1.08
DcxO88809 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.77■■□□□ 1.08
DcxO88809 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.77■■□□□ 1.08
DcxO88809 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DcxO88809 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.77■■□□□ 1.08
DcxO88809 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.77■■□□□ 1.08
DcxO88809 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.77■■□□□ 1.08
DcxO88809 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
DcxO88809 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
DcxO88809 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DcxO88809 Reep4-203ENSMUST00000226563 1444 ntBASIC21.77■■□□□ 1.08
DcxO88809 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DcxO88809 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
DcxO88809 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.77■■□□□ 1.07
DcxO88809 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DcxO88809 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.76■■□□□ 1.07
DcxO88809 Gm13168-201ENSMUST00000121771 632 ntBASIC21.76■■□□□ 1.07
DcxO88809 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DcxO88809 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.76■■□□□ 1.07
DcxO88809 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.76■■□□□ 1.07
DcxO88809 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DcxO88809 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DcxO88809 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DcxO88809 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
DcxO88809 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.76■■□□□ 1.07
DcxO88809 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DcxO88809 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
DcxO88809 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.75■■□□□ 1.07
DcxO88809 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
DcxO88809 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
DcxO88809 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms