Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn1O88551 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cldn1O88551 Smad6-203ENSMUST00000179458 273 ntBASIC17.1■□□□□ 0.33
Cldn1O88551 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.1■□□□□ 0.33
Cldn1O88551 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn1O88551 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn1O88551 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn1O88551 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.1■□□□□ 0.33
Cldn1O88551 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn1O88551 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn1O88551 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn1O88551 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn1O88551 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn1O88551 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn1O88551 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.09■□□□□ 0.33
Cldn1O88551 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.09■□□□□ 0.33
Cldn1O88551 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn1O88551 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn1O88551 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn1O88551 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cldn1O88551 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn1O88551 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn1O88551 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn1O88551 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn1O88551 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.09■□□□□ 0.33
Cldn1O88551 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn1O88551 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn1O88551 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn1O88551 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn1O88551 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn1O88551 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
Cldn1O88551 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Cldn1O88551 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.08■□□□□ 0.32
Cldn1O88551 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
Cldn1O88551 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn1O88551 Gm43530-201ENSMUST00000195920 274 ntBASIC17.08■□□□□ 0.32
Cldn1O88551 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.08■□□□□ 0.32
Cldn1O88551 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cldn1O88551 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cldn1O88551 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cldn1O88551 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cldn1O88551 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn1O88551 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn1O88551 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn1O88551 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn1O88551 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.07■□□□□ 0.32
Cldn1O88551 Gm10602-201ENSMUST00000098239 609 ntBASIC17.07■□□□□ 0.32
Cldn1O88551 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn1O88551 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn1O88551 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Cldn1O88551 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn1O88551 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cldn1O88551 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn1O88551 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cldn1O88551 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Cldn1O88551 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn1O88551 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.05■□□□□ 0.32
Cldn1O88551 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn1O88551 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn1O88551 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn1O88551 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn1O88551 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn1O88551 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cldn1O88551 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn1O88551 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn1O88551 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn1O88551 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.04■□□□□ 0.32
Cldn1O88551 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn1O88551 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn1O88551 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.04■□□□□ 0.32
Cldn1O88551 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.04■□□□□ 0.32
Cldn1O88551 Gm42778-201ENSMUST00000199644 553 ntBASIC17.04■□□□□ 0.32
Cldn1O88551 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn1O88551 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn1O88551 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn1O88551 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn1O88551 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn1O88551 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn1O88551 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn1O88551 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn1O88551 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldn1O88551 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.03■□□□□ 0.32
Cldn1O88551 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cldn1O88551 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cldn1O88551 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn1O88551 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn1O88551 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn1O88551 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn1O88551 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn1O88551 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn1O88551 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn1O88551 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.02■□□□□ 0.32
Cldn1O88551 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms