Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cacna1hO88427 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cacna1hO88427 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cacna1hO88427 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Cacna1hO88427 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cacna1hO88427 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cacna1hO88427 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cacna1hO88427 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cacna1hO88427 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cacna1hO88427 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cacna1hO88427 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.83■□□□□ 0.76
Cacna1hO88427 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Cacna1hO88427 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Cacna1hO88427 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cacna1hO88427 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1hO88427 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1hO88427 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1hO88427 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cacna1hO88427 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1hO88427 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1hO88427 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1hO88427 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cacna1hO88427 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.82■□□□□ 0.76
Cacna1hO88427 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.81■□□□□ 0.76
Cacna1hO88427 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1hO88427 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1hO88427 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1hO88427 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1hO88427 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cacna1hO88427 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1hO88427 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacna1hO88427 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1hO88427 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.8■□□□□ 0.76
Cacna1hO88427 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1hO88427 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cacna1hO88427 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cacna1hO88427 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.8■□□□□ 0.76
Cacna1hO88427 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1hO88427 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cacna1hO88427 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1hO88427 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1hO88427 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1hO88427 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.79■□□□□ 0.76
Cacna1hO88427 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.79■□□□□ 0.76
Cacna1hO88427 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1hO88427 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Cacna1hO88427 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1hO88427 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cacna1hO88427 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Cacna1hO88427 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1hO88427 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1hO88427 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1hO88427 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1hO88427 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1hO88427 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.78■□□□□ 0.76
Cacna1hO88427 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.78■□□□□ 0.76
Cacna1hO88427 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1hO88427 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Cacna1hO88427 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1hO88427 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1hO88427 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1hO88427 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.77■□□□□ 0.76
Cacna1hO88427 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1hO88427 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1hO88427 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1hO88427 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cacna1hO88427 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cacna1hO88427 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1hO88427 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1hO88427 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1hO88427 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cacna1hO88427 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1hO88427 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cacna1hO88427 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.76■□□□□ 0.75
Cacna1hO88427 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1hO88427 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1hO88427 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.76■□□□□ 0.75
Cacna1hO88427 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1hO88427 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacna1hO88427 Gm5643-201ENSMUST00000117081 966 ntBASIC19.75■□□□□ 0.75
Cacna1hO88427 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacna1hO88427 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cacna1hO88427 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacna1hO88427 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.75■□□□□ 0.75
Cacna1hO88427 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1hO88427 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1hO88427 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cacna1hO88427 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1hO88427 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1hO88427 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1hO88427 Gm26524-201ENSMUST00000192339 390 ntBASIC19.73■□□□□ 0.75
Cacna1hO88427 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1hO88427 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1hO88427 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1hO88427 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.73■□□□□ 0.75
Cacna1hO88427 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1hO88427 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.73■□□□□ 0.75
Cacna1hO88427 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cacna1hO88427 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1hO88427 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms