Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tulp3O88413 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tulp3O88413 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tulp3O88413 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tulp3O88413 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tulp3O88413 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tulp3O88413 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tulp3O88413 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tulp3O88413 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tulp3O88413 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tulp3O88413 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tulp3O88413 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.65■□□□□ 0.58
Tulp3O88413 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tulp3O88413 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tulp3O88413 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.65■□□□□ 0.58
Tulp3O88413 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tulp3O88413 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tulp3O88413 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tulp3O88413 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tulp3O88413 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tulp3O88413 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tulp3O88413 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.64■□□□□ 0.58
Tulp3O88413 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Tulp3O88413 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tulp3O88413 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.64■□□□□ 0.57
Tulp3O88413 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Tulp3O88413 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tulp3O88413 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Tulp3O88413 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tulp3O88413 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tulp3O88413 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Tulp3O88413 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.63■□□□□ 0.57
Tulp3O88413 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tulp3O88413 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tulp3O88413 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tulp3O88413 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Tulp3O88413 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tulp3O88413 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tulp3O88413 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.62■□□□□ 0.57
Tulp3O88413 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tulp3O88413 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tulp3O88413 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tulp3O88413 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tulp3O88413 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tulp3O88413 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tulp3O88413 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tulp3O88413 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tulp3O88413 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tulp3O88413 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tulp3O88413 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tulp3O88413 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tulp3O88413 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Tulp3O88413 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tulp3O88413 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tulp3O88413 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tulp3O88413 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.6■□□□□ 0.57
Tulp3O88413 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tulp3O88413 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tulp3O88413 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Tulp3O88413 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.6■□□□□ 0.57
Tulp3O88413 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tulp3O88413 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tulp3O88413 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tulp3O88413 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tulp3O88413 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tulp3O88413 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tulp3O88413 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tulp3O88413 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.59■□□□□ 0.57
Tulp3O88413 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tulp3O88413 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.59■□□□□ 0.57
Tulp3O88413 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.59■□□□□ 0.57
Tulp3O88413 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tulp3O88413 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tulp3O88413 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.58■□□□□ 0.57
Tulp3O88413 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tulp3O88413 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tulp3O88413 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tulp3O88413 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.58■□□□□ 0.57
Tulp3O88413 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tulp3O88413 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tulp3O88413 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tulp3O88413 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tulp3O88413 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.57■□□□□ 0.56
Tulp3O88413 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tulp3O88413 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tulp3O88413 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tulp3O88413 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tulp3O88413 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tulp3O88413 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.57■□□□□ 0.56
Tulp3O88413 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tulp3O88413 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tulp3O88413 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tulp3O88413 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tulp3O88413 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tulp3O88413 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tulp3O88413 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Tulp3O88413 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tulp3O88413 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.56■□□□□ 0.56
Tulp3O88413 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tulp3O88413 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms