Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn5O54942 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn5O54942 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cldn5O54942 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn5O54942 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cldn5O54942 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn5O54942 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn5O54942 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.87■□□□□ 0.93
Cldn5O54942 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.87■□□□□ 0.93
Cldn5O54942 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn5O54942 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn5O54942 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn5O54942 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn5O54942 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn5O54942 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn5O54942 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn5O54942 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn5O54942 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cldn5O54942 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cldn5O54942 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn5O54942 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn5O54942 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn5O54942 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Cldn5O54942 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn5O54942 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn5O54942 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cldn5O54942 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn5O54942 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn5O54942 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.85■□□□□ 0.93
Cldn5O54942 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn5O54942 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn5O54942 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.84■□□□□ 0.93
Cldn5O54942 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn5O54942 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn5O54942 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cldn5O54942 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.84■□□□□ 0.93
Cldn5O54942 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.84■□□□□ 0.93
Cldn5O54942 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.84■□□□□ 0.93
Cldn5O54942 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn5O54942 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Cldn5O54942 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn5O54942 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn5O54942 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn5O54942 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
Cldn5O54942 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Cldn5O54942 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cldn5O54942 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.83■□□□□ 0.93
Cldn5O54942 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.83■□□□□ 0.93
Cldn5O54942 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn5O54942 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn5O54942 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn5O54942 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn5O54942 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn5O54942 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn5O54942 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn5O54942 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn5O54942 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Cldn5O54942 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn5O54942 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn5O54942 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cldn5O54942 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn5O54942 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn5O54942 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn5O54942 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.81■□□□□ 0.92
Cldn5O54942 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.81■□□□□ 0.92
Cldn5O54942 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn5O54942 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn5O54942 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn5O54942 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn5O54942 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn5O54942 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn5O54942 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cldn5O54942 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn5O54942 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn5O54942 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn5O54942 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn5O54942 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.8■□□□□ 0.92
Cldn5O54942 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn5O54942 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Cldn5O54942 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn5O54942 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn5O54942 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Cldn5O54942 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn5O54942 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn5O54942 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.78■□□□□ 0.92
Cldn5O54942 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Cldn5O54942 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Cldn5O54942 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn5O54942 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn5O54942 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn5O54942 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn5O54942 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.78■□□□□ 0.92
Cldn5O54942 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn5O54942 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Cldn5O54942 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn5O54942 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn5O54942 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn5O54942 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cldn5O54942 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cldn5O54942 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms