Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DffbO54788 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
DffbO54788 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
DffbO54788 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DffbO54788 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DffbO54788 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DffbO54788 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.13■□□□□ 0.33
DffbO54788 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DffbO54788 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.13■□□□□ 0.33
DffbO54788 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.13■□□□□ 0.33
DffbO54788 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DffbO54788 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
DffbO54788 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DffbO54788 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DffbO54788 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DffbO54788 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DffbO54788 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DffbO54788 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.12■□□□□ 0.33
DffbO54788 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.12■□□□□ 0.33
DffbO54788 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DffbO54788 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DffbO54788 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DffbO54788 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DffbO54788 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DffbO54788 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DffbO54788 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.11■□□□□ 0.33
DffbO54788 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DffbO54788 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DffbO54788 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
DffbO54788 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DffbO54788 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DffbO54788 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DffbO54788 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DffbO54788 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DffbO54788 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DffbO54788 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
DffbO54788 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DffbO54788 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DffbO54788 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DffbO54788 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DffbO54788 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DffbO54788 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DffbO54788 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DffbO54788 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DffbO54788 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
DffbO54788 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DffbO54788 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DffbO54788 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DffbO54788 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DffbO54788 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DffbO54788 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DffbO54788 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.09■□□□□ 0.33
DffbO54788 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DffbO54788 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.09■□□□□ 0.33
DffbO54788 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.09■□□□□ 0.33
DffbO54788 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DffbO54788 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DffbO54788 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DffbO54788 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DffbO54788 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DffbO54788 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DffbO54788 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DffbO54788 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
DffbO54788 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
DffbO54788 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
DffbO54788 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DffbO54788 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DffbO54788 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DffbO54788 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DffbO54788 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.08■□□□□ 0.32
DffbO54788 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
DffbO54788 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
DffbO54788 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DffbO54788 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DffbO54788 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
DffbO54788 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DffbO54788 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DffbO54788 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.07■□□□□ 0.32
DffbO54788 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.07■□□□□ 0.32
DffbO54788 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
DffbO54788 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DffbO54788 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.07■□□□□ 0.32
DffbO54788 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
DffbO54788 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.07■□□□□ 0.32
DffbO54788 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DffbO54788 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DffbO54788 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DffbO54788 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.06■□□□□ 0.32
DffbO54788 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DffbO54788 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DffbO54788 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.06■□□□□ 0.32
DffbO54788 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DffbO54788 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DffbO54788 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DffbO54788 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DffbO54788 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DffbO54788 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
DffbO54788 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DffbO54788 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DffbO54788 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms