Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Abca4O35600 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abca4O35600 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.17■□□□□ 0.66
Abca4O35600 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.17■□□□□ 0.66
Abca4O35600 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abca4O35600 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Abca4O35600 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Abca4O35600 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.16■□□□□ 0.66
Abca4O35600 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Abca4O35600 Gm27741-201ENSMUST00000185060 237 ntBASIC19.15■□□□□ 0.66
Abca4O35600 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.15■□□□□ 0.66
Abca4O35600 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Abca4O35600 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.15■□□□□ 0.66
Abca4O35600 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Abca4O35600 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Abca4O35600 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Abca4O35600 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Abca4O35600 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abca4O35600 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abca4O35600 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abca4O35600 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abca4O35600 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Abca4O35600 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Abca4O35600 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.13■□□□□ 0.65
Abca4O35600 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Abca4O35600 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abca4O35600 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.13■□□□□ 0.65
Abca4O35600 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abca4O35600 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abca4O35600 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.13■□□□□ 0.65
Abca4O35600 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Abca4O35600 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.13■□□□□ 0.65
Abca4O35600 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.13■□□□□ 0.65
Abca4O35600 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abca4O35600 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abca4O35600 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Abca4O35600 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abca4O35600 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Abca4O35600 Gm21362-201ENSMUST00000194272 928 ntBASIC19.12■□□□□ 0.65
Abca4O35600 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.12■□□□□ 0.65
Abca4O35600 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.12■□□□□ 0.65
Abca4O35600 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Abca4O35600 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Abca4O35600 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Abca4O35600 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Abca4O35600 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abca4O35600 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abca4O35600 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.11■□□□□ 0.65
Abca4O35600 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Abca4O35600 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abca4O35600 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.11■□□□□ 0.65
Abca4O35600 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Abca4O35600 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Abca4O35600 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Abca4O35600 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Abca4O35600 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abca4O35600 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abca4O35600 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Abca4O35600 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abca4O35600 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abca4O35600 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abca4O35600 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abca4O35600 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.1■□□□□ 0.65
Abca4O35600 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abca4O35600 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.09■□□□□ 0.65
Abca4O35600 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abca4O35600 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abca4O35600 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Abca4O35600 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abca4O35600 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abca4O35600 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Abca4O35600 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.09■□□□□ 0.65
Abca4O35600 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Abca4O35600 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Abca4O35600 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Abca4O35600 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Abca4O35600 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Abca4O35600 Gm26524-201ENSMUST00000192339 390 ntBASIC19.08■□□□□ 0.64
Abca4O35600 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.08■□□□□ 0.64
Abca4O35600 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.07■□□□□ 0.64
Abca4O35600 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.07■□□□□ 0.64
Abca4O35600 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.07■□□□□ 0.64
Abca4O35600 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abca4O35600 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Abca4O35600 Gm37055-201ENSMUST00000191866 133 ntBASIC19.06■□□□□ 0.64
Abca4O35600 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Abca4O35600 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abca4O35600 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms