Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk4O35493 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.12■□□□□ 0.65
Clk4O35493 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk4O35493 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clk4O35493 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.11■□□□□ 0.65
Clk4O35493 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.11■□□□□ 0.65
Clk4O35493 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.11■□□□□ 0.65
Clk4O35493 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clk4O35493 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clk4O35493 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Clk4O35493 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk4O35493 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.1■□□□□ 0.65
Clk4O35493 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clk4O35493 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.1■□□□□ 0.65
Clk4O35493 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk4O35493 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clk4O35493 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk4O35493 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk4O35493 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Clk4O35493 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk4O35493 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.09■□□□□ 0.65
Clk4O35493 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clk4O35493 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clk4O35493 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Clk4O35493 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clk4O35493 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.09■□□□□ 0.65
Clk4O35493 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.09■□□□□ 0.65
Clk4O35493 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clk4O35493 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clk4O35493 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clk4O35493 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.08■□□□□ 0.65
Clk4O35493 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clk4O35493 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clk4O35493 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clk4O35493 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clk4O35493 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.08■□□□□ 0.64
Clk4O35493 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clk4O35493 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clk4O35493 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clk4O35493 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clk4O35493 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clk4O35493 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clk4O35493 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clk4O35493 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Clk4O35493 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clk4O35493 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.07■□□□□ 0.64
Clk4O35493 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clk4O35493 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clk4O35493 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk4O35493 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk4O35493 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk4O35493 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.06■□□□□ 0.64
Clk4O35493 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.06■□□□□ 0.64
Clk4O35493 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clk4O35493 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk4O35493 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clk4O35493 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clk4O35493 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clk4O35493 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk4O35493 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clk4O35493 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk4O35493 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk4O35493 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk4O35493 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk4O35493 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk4O35493 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk4O35493 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
Clk4O35493 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk4O35493 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk4O35493 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk4O35493 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.04■□□□□ 0.64
Clk4O35493 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk4O35493 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.04■□□□□ 0.64
Clk4O35493 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Clk4O35493 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Clk4O35493 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk4O35493 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk4O35493 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.03■□□□□ 0.64
Clk4O35493 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.03■□□□□ 0.64
Clk4O35493 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk4O35493 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk4O35493 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk4O35493 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clk4O35493 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clk4O35493 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clk4O35493 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clk4O35493 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clk4O35493 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clk4O35493 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.02■□□□□ 0.64
Clk4O35493 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clk4O35493 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.02■□□□□ 0.64
Clk4O35493 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clk4O35493 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Clk4O35493 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clk4O35493 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Clk4O35493 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clk4O35493 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clk4O35493 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.01■□□□□ 0.63
Clk4O35493 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clk4O35493 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms