Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
Col15a1O35206 Reep4-203ENSMUST00000226563 1444 ntBASIC26.1■■□□□ 1.77
Col15a1O35206 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col15a1O35206 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col15a1O35206 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Col15a1O35206 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Col15a1O35206 Gm13234-201ENSMUST00000120010 747 ntBASIC26.09■■□□□ 1.77
Col15a1O35206 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC26.09■■□□□ 1.77
Col15a1O35206 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
Col15a1O35206 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col15a1O35206 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC26.08■■□□□ 1.77
Col15a1O35206 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Col15a1O35206 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
Col15a1O35206 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Col15a1O35206 Gm12933-201ENSMUST00000120203 872 ntBASIC26.07■■□□□ 1.76
Col15a1O35206 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Col15a1O35206 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col15a1O35206 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC26.07■■□□□ 1.76
Col15a1O35206 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Col15a1O35206 Gm12669-201ENSMUST00000122162 1009 ntBASIC26.07■■□□□ 1.76
Col15a1O35206 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Col15a1O35206 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC26.07■■□□□ 1.76
Col15a1O35206 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col15a1O35206 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col15a1O35206 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC26.06■■□□□ 1.76
Col15a1O35206 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col15a1O35206 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col15a1O35206 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col15a1O35206 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col15a1O35206 AC122428.2-201ENSMUST00000216321 1832 ntBASIC26.05■■□□□ 1.76
Col15a1O35206 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col15a1O35206 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col15a1O35206 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Col15a1O35206 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col15a1O35206 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col15a1O35206 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col15a1O35206 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col15a1O35206 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col15a1O35206 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col15a1O35206 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC26.04■■□□□ 1.76
Col15a1O35206 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Col15a1O35206 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col15a1O35206 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col15a1O35206 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col15a1O35206 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col15a1O35206 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col15a1O35206 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col15a1O35206 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col15a1O35206 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col15a1O35206 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC26.03■■□□□ 1.76
Col15a1O35206 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col15a1O35206 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col15a1O35206 Gm10602-201ENSMUST00000098239 609 ntBASIC26.03■■□□□ 1.76
Col15a1O35206 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC26.02■■□□□ 1.76
Col15a1O35206 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Col15a1O35206 Gm27801-201ENSMUST00000184174 223 ntBASIC26.02■■□□□ 1.76
Col15a1O35206 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Col15a1O35206 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col15a1O35206 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Col15a1O35206 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Col15a1O35206 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Col15a1O35206 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col15a1O35206 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col15a1O35206 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col15a1O35206 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col15a1O35206 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
Col15a1O35206 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC26■■□□□ 1.75
Col15a1O35206 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC26■■□□□ 1.75
Col15a1O35206 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col15a1O35206 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC26■■□□□ 1.75
Col15a1O35206 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC26■■□□□ 1.75
Col15a1O35206 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Col15a1O35206 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Col15a1O35206 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col15a1O35206 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col15a1O35206 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col15a1O35206 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col15a1O35206 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.98■■□□□ 1.75
Col15a1O35206 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC25.98■■□□□ 1.75
Col15a1O35206 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col15a1O35206 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Col15a1O35206 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col15a1O35206 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Col15a1O35206 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col15a1O35206 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Col15a1O35206 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Col15a1O35206 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col15a1O35206 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC25.97■■□□□ 1.75
Col15a1O35206 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col15a1O35206 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC25.96■■□□□ 1.75
Col15a1O35206 Ap3s1-204ENSMUST00000225520 957 ntBASIC25.96■■□□□ 1.75
Col15a1O35206 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
Col15a1O35206 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Col15a1O35206 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Col15a1O35206 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Col15a1O35206 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col15a1O35206 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Col15a1O35206 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Col15a1O35206 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col15a1O35206 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms