Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gfra3O35118 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.29■□□□□ 0.36
Gfra3O35118 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gfra3O35118 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfra3O35118 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gfra3O35118 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gfra3O35118 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Gfra3O35118 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfra3O35118 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gfra3O35118 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfra3O35118 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gfra3O35118 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Gfra3O35118 Gm8493-201ENSMUST00000196881 489 ntBASIC17.28■□□□□ 0.36
Gfra3O35118 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfra3O35118 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfra3O35118 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfra3O35118 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfra3O35118 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Gfra3O35118 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.27■□□□□ 0.36
Gfra3O35118 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gfra3O35118 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gfra3O35118 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gfra3O35118 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gfra3O35118 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gfra3O35118 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gfra3O35118 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gfra3O35118 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gfra3O35118 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gfra3O35118 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
Gfra3O35118 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gfra3O35118 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gfra3O35118 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gfra3O35118 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gfra3O35118 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.26■□□□□ 0.35
Gfra3O35118 Gm43017-201ENSMUST00000198296 752 ntBASIC17.26■□□□□ 0.35
Gfra3O35118 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gfra3O35118 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gfra3O35118 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gfra3O35118 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gfra3O35118 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gfra3O35118 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gfra3O35118 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.26■□□□□ 0.35
Gfra3O35118 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfra3O35118 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.25■□□□□ 0.35
Gfra3O35118 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfra3O35118 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.25■□□□□ 0.35
Gfra3O35118 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfra3O35118 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfra3O35118 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.25■□□□□ 0.35
Gfra3O35118 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfra3O35118 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.25■□□□□ 0.35
Gfra3O35118 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfra3O35118 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gfra3O35118 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfra3O35118 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfra3O35118 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.25■□□□□ 0.35
Gfra3O35118 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfra3O35118 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gfra3O35118 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gfra3O35118 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gfra3O35118 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gfra3O35118 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gfra3O35118 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.24■□□□□ 0.35
Gfra3O35118 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Gfra3O35118 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.24■□□□□ 0.35
Gfra3O35118 Spcs1-204ENSMUST00000226782 949 ntBASIC17.24■□□□□ 0.35
Gfra3O35118 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Gfra3O35118 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gfra3O35118 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gfra3O35118 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gfra3O35118 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gfra3O35118 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gfra3O35118 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.23■□□□□ 0.35
Gfra3O35118 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gfra3O35118 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gfra3O35118 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.23■□□□□ 0.35
Gfra3O35118 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.23■□□□□ 0.35
Gfra3O35118 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gfra3O35118 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gfra3O35118 Mir6236-201ENSMUST00000184437 123 ntBASIC17.23■□□□□ 0.35
Gfra3O35118 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Gfra3O35118 Gm43173-201ENSMUST00000202246 593 ntBASIC17.23■□□□□ 0.35
Gfra3O35118 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gfra3O35118 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gfra3O35118 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gfra3O35118 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Gfra3O35118 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gfra3O35118 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gfra3O35118 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Gfra3O35118 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gfra3O35118 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gfra3O35118 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gfra3O35118 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gfra3O35118 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gfra3O35118 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gfra3O35118 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gfra3O35118 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gfra3O35118 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.21■□□□□ 0.35
Gfra3O35118 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gfra3O35118 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms