Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
AlyrefO08583 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
AlyrefO08583 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AlyrefO08583 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AlyrefO08583 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.24■□□□□ 0.83
AlyrefO08583 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AlyrefO08583 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AlyrefO08583 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.24■□□□□ 0.83
AlyrefO08583 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
AlyrefO08583 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
AlyrefO08583 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AlyrefO08583 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.24■□□□□ 0.83
AlyrefO08583 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
AlyrefO08583 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AlyrefO08583 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AlyrefO08583 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.24■□□□□ 0.83
AlyrefO08583 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AlyrefO08583 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AlyrefO08583 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AlyrefO08583 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
AlyrefO08583 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
AlyrefO08583 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.23■□□□□ 0.83
AlyrefO08583 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
AlyrefO08583 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AlyrefO08583 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
AlyrefO08583 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AlyrefO08583 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.23■□□□□ 0.83
AlyrefO08583 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AlyrefO08583 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AlyrefO08583 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AlyrefO08583 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AlyrefO08583 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AlyrefO08583 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
AlyrefO08583 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.22■□□□□ 0.83
AlyrefO08583 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
AlyrefO08583 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AlyrefO08583 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
AlyrefO08583 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AlyrefO08583 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AlyrefO08583 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AlyrefO08583 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
AlyrefO08583 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.21■□□□□ 0.83
AlyrefO08583 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AlyrefO08583 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AlyrefO08583 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.21■□□□□ 0.83
AlyrefO08583 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.21■□□□□ 0.83
AlyrefO08583 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AlyrefO08583 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
AlyrefO08583 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AlyrefO08583 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
AlyrefO08583 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AlyrefO08583 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
AlyrefO08583 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
AlyrefO08583 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
AlyrefO08583 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AlyrefO08583 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AlyrefO08583 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AlyrefO08583 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AlyrefO08583 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AlyrefO08583 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AlyrefO08583 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
AlyrefO08583 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AlyrefO08583 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.18■□□□□ 0.82
AlyrefO08583 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.18■□□□□ 0.82
AlyrefO08583 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AlyrefO08583 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AlyrefO08583 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
AlyrefO08583 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AlyrefO08583 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AlyrefO08583 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.17■□□□□ 0.82
AlyrefO08583 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AlyrefO08583 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.17■□□□□ 0.82
AlyrefO08583 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
AlyrefO08583 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AlyrefO08583 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.17■□□□□ 0.82
AlyrefO08583 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.17■□□□□ 0.82
AlyrefO08583 Gm7514-201ENSMUST00000209475 934 ntBASIC20.17■□□□□ 0.82
AlyrefO08583 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AlyrefO08583 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AlyrefO08583 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AlyrefO08583 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AlyrefO08583 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AlyrefO08583 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AlyrefO08583 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
AlyrefO08583 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.16■□□□□ 0.82
AlyrefO08583 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.16■□□□□ 0.82
AlyrefO08583 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.16■□□□□ 0.82
AlyrefO08583 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.16■□□□□ 0.82
AlyrefO08583 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AlyrefO08583 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AlyrefO08583 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AlyrefO08583 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
AlyrefO08583 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.15■□□□□ 0.82
AlyrefO08583 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AlyrefO08583 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AlyrefO08583 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AlyrefO08583 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AlyrefO08583 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.15■□□□□ 0.82
AlyrefO08583 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
AlyrefO08583 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms