Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rundc3aO08576 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.51■□□□□ 0.71
Rundc3aO08576 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rundc3aO08576 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.5■□□□□ 0.71
Rundc3aO08576 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.5■□□□□ 0.71
Rundc3aO08576 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rundc3aO08576 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rundc3aO08576 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rundc3aO08576 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3aO08576 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3aO08576 Iqck-206ENSMUST00000208658 2891 ntBASIC19.49■□□□□ 0.71
Rundc3aO08576 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3aO08576 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.49■□□□□ 0.71
Rundc3aO08576 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3aO08576 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rundc3aO08576 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.49■□□□□ 0.71
Rundc3aO08576 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.49■□□□□ 0.71
Rundc3aO08576 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3aO08576 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.49■□□□□ 0.71
Rundc3aO08576 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Rundc3aO08576 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3aO08576 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3aO08576 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.48■□□□□ 0.71
Rundc3aO08576 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Rundc3aO08576 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.48■□□□□ 0.71
Rundc3aO08576 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rundc3aO08576 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.48■□□□□ 0.71
Rundc3aO08576 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.48■□□□□ 0.71
Rundc3aO08576 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.48■□□□□ 0.71
Rundc3aO08576 Gm40881-201ENSMUST00000223397 166 ntBASIC19.48■□□□□ 0.71
Rundc3aO08576 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rundc3aO08576 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rundc3aO08576 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.48■□□□□ 0.71
Rundc3aO08576 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rundc3aO08576 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rundc3aO08576 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rundc3aO08576 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rundc3aO08576 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3aO08576 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3aO08576 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3aO08576 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.46■□□□□ 0.71
Rundc3aO08576 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Rundc3aO08576 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3aO08576 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3aO08576 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3aO08576 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3aO08576 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3aO08576 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3aO08576 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3aO08576 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rundc3aO08576 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3aO08576 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3aO08576 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3aO08576 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3aO08576 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3aO08576 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3aO08576 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3aO08576 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3aO08576 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rundc3aO08576 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rundc3aO08576 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rundc3aO08576 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rundc3aO08576 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rundc3aO08576 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rundc3aO08576 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rundc3aO08576 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rundc3aO08576 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3aO08576 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3aO08576 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rundc3aO08576 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3aO08576 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3aO08576 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3aO08576 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rundc3aO08576 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3aO08576 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3aO08576 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.43■□□□□ 0.7
Rundc3aO08576 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3aO08576 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3aO08576 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rundc3aO08576 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3aO08576 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3aO08576 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3aO08576 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3aO08576 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Rundc3aO08576 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rundc3aO08576 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rundc3aO08576 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rundc3aO08576 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rundc3aO08576 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rundc3aO08576 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.41■□□□□ 0.7
Rundc3aO08576 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.41■□□□□ 0.7
Rundc3aO08576 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rundc3aO08576 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rundc3aO08576 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rundc3aO08576 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rundc3aO08576 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rundc3aO08576 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rundc3aO08576 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rundc3aO08576 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rundc3aO08576 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms