Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13d-3J3QMG8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav13d-3J3QMG8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav13d-3J3QMG8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav13d-3J3QMG8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Trav13d-3J3QMG8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav13d-3J3QMG8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav13d-3J3QMG8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.63■□□□□ 0.41
Trav13d-3J3QMG8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.63■□□□□ 0.41
Trav13d-3J3QMG8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav13d-3J3QMG8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13d-3J3QMG8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13d-3J3QMG8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13d-3J3QMG8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Trav13d-3J3QMG8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav13d-3J3QMG8 Mir6236-201ENSMUST00000184437 123 ntBASIC17.62■□□□□ 0.41
Trav13d-3J3QMG8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13d-3J3QMG8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav13d-3J3QMG8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13d-3J3QMG8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13d-3J3QMG8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13d-3J3QMG8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13d-3J3QMG8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13d-3J3QMG8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav13d-3J3QMG8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13d-3J3QMG8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Trav13d-3J3QMG8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13d-3J3QMG8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Trav13d-3J3QMG8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav13d-3J3QMG8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13d-3J3QMG8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav13d-3J3QMG8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav13d-3J3QMG8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav13d-3J3QMG8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav13d-3J3QMG8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13d-3J3QMG8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13d-3J3QMG8 Golgb1-201ENSMUST00000023534 498 ntBASIC17.58■□□□□ 0.4
Trav13d-3J3QMG8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13d-3J3QMG8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav13d-3J3QMG8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13d-3J3QMG8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13d-3J3QMG8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Gm12922-201ENSMUST00000120626 809 ntBASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-3J3QMG8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13d-3J3QMG8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13d-3J3QMG8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13d-3J3QMG8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms