Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Serp2-204ENSMUST00000228055 705 ntBASIC20.02■□□□□ 0.8
Gm3139J3QK78 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Gm3139J3QK78 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Gm3139J3QK78 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Gm3139J3QK78 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm3139J3QK78 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Gm3139J3QK78 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3139J3QK78 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
Gm3139J3QK78 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.01■□□□□ 0.79
Gm3139J3QK78 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3139J3QK78 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.01■□□□□ 0.79
Gm3139J3QK78 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3139J3QK78 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3139J3QK78 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.01■□□□□ 0.79
Gm3139J3QK78 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3139J3QK78 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm3139J3QK78 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm3139J3QK78 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20■□□□□ 0.79
Gm3139J3QK78 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20■□□□□ 0.79
Gm3139J3QK78 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Gm3139J3QK78 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gm3139J3QK78 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Gm3139J3QK78 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gm3139J3QK78 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm3139J3QK78 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20■□□□□ 0.79
Gm3139J3QK78 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Gm43173-201ENSMUST00000202246 593 ntBASIC19.99■□□□□ 0.79
Gm3139J3QK78 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3139J3QK78 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3139J3QK78 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3139J3QK78 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.98■□□□□ 0.79
Gm3139J3QK78 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
Gm3139J3QK78 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3139J3QK78 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.98■□□□□ 0.79
Gm3139J3QK78 Gm43017-201ENSMUST00000198296 752 ntBASIC19.98■□□□□ 0.79
Gm3139J3QK78 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3139J3QK78 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3139J3QK78 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3139J3QK78 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3139J3QK78 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3139J3QK78 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3139J3QK78 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3139J3QK78 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3139J3QK78 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Gm3139J3QK78 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.97■□□□□ 0.79
Gm3139J3QK78 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.97■□□□□ 0.79
Gm3139J3QK78 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3139J3QK78 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.97■□□□□ 0.79
Gm3139J3QK78 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.97■□□□□ 0.79
Gm3139J3QK78 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3139J3QK78 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3139J3QK78 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3139J3QK78 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3139J3QK78 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3139J3QK78 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Gm3139J3QK78 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3139J3QK78 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3139J3QK78 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3139J3QK78 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.96■□□□□ 0.79
Gm3139J3QK78 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3139J3QK78 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3139J3QK78 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3139J3QK78 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3139J3QK78 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Gm3139J3QK78 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3139J3QK78 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Gm3139J3QK78 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.96■□□□□ 0.79
Gm3139J3QK78 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3139J3QK78 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3139J3QK78 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Gm3139J3QK78 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3139J3QK78 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3139J3QK78 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3139J3QK78 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.95■□□□□ 0.78
Gm3139J3QK78 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3139J3QK78 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.95■□□□□ 0.78
Gm3139J3QK78 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3139J3QK78 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3139J3QK78 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3139J3QK78 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3139J3QK78 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Gm3139J3QK78 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3139J3QK78 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3139J3QK78 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.94■□□□□ 0.78
Gm3139J3QK78 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Gm3139J3QK78 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Gm3139J3QK78 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.94■□□□□ 0.78
Gm3139J3QK78 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms