Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Gm17535J3KMR8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm17535J3KMR8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm17535J3KMR8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.46■■□□□ 1.03
Gm17535J3KMR8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm17535J3KMR8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Gm17535J3KMR8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm17535J3KMR8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm17535J3KMR8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm17535J3KMR8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Gm17535J3KMR8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gm17535J3KMR8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gm17535J3KMR8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm17535J3KMR8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.45■■□□□ 1.02
Gm17535J3KMR8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm17535J3KMR8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm17535J3KMR8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Gm17535J3KMR8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.44■■□□□ 1.02
Gm17535J3KMR8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm17535J3KMR8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm17535J3KMR8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Gm17535J3KMR8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm17535J3KMR8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Gm17535J3KMR8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm17535J3KMR8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.44■■□□□ 1.02
Gm17535J3KMR8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Gm17535J3KMR8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
Gm17535J3KMR8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.43■■□□□ 1.02
Gm17535J3KMR8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm17535J3KMR8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm17535J3KMR8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Gm17535J3KMR8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm17535J3KMR8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.43■■□□□ 1.02
Gm17535J3KMR8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm17535J3KMR8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm17535J3KMR8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Gm17535J3KMR8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Gm17535J3KMR8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm17535J3KMR8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm17535J3KMR8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm17535J3KMR8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm17535J3KMR8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.41■■□□□ 1.02
Gm17535J3KMR8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm17535J3KMR8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm17535J3KMR8 Smad6-203ENSMUST00000179458 273 ntBASIC21.41■■□□□ 1.02
Gm17535J3KMR8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm17535J3KMR8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm17535J3KMR8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm17535J3KMR8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Gm17535J3KMR8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm17535J3KMR8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Gm17535J3KMR8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm17535J3KMR8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm17535J3KMR8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Gm17535J3KMR8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Gm17535J3KMR8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm17535J3KMR8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gm17535J3KMR8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.39■■□□□ 1.02
Gm17535J3KMR8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Gm17535J3KMR8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm17535J3KMR8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm17535J3KMR8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm17535J3KMR8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Gm17535J3KMR8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm17535J3KMR8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm17535J3KMR8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm17535J3KMR8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm17535J3KMR8 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.38■■□□□ 1.01
Gm17535J3KMR8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm17535J3KMR8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Gm17535J3KMR8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm17535J3KMR8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm17535J3KMR8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Gm17535J3KMR8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm17535J3KMR8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm17535J3KMR8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.37■■□□□ 1.01
Gm17535J3KMR8 Gm26833-201ENSMUST00000180899 440 ntBASIC21.37■■□□□ 1.01
Gm17535J3KMR8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.37■■□□□ 1.01
Gm17535J3KMR8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.37■■□□□ 1.01
Gm17535J3KMR8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Gm17535J3KMR8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm17535J3KMR8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gm17535J3KMR8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Gm17535J3KMR8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Gm17535J3KMR8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm17535J3KMR8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Gm17535J3KMR8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Gm17535J3KMR8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
Gm17535J3KMR8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gm17535J3KMR8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.36■■□□□ 1.01
Gm17535J3KMR8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm17535J3KMR8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Gm17535J3KMR8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm17535J3KMR8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm17535J3KMR8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm17535J3KMR8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.35■■□□□ 1.01
Gm17535J3KMR8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm17535J3KMR8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm17535J3KMR8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Gm17535J3KMR8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms