Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn20G5E8X0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn20G5E8X0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn20G5E8X0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn20G5E8X0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.36■□□□□ 0.37
Cldn20G5E8X0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn20G5E8X0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn20G5E8X0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn20G5E8X0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn20G5E8X0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn20G5E8X0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cldn20G5E8X0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn20G5E8X0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.35■□□□□ 0.37
Cldn20G5E8X0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn20G5E8X0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn20G5E8X0 Gm43566-201ENSMUST00000196851 808 ntBASIC17.35■□□□□ 0.37
Cldn20G5E8X0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn20G5E8X0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn20G5E8X0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn20G5E8X0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn20G5E8X0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn20G5E8X0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.33■□□□□ 0.37
Cldn20G5E8X0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Cldn20G5E8X0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn20G5E8X0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn20G5E8X0 Golph3-205ENSMUST00000228671 2842 ntBASIC17.33■□□□□ 0.36
Cldn20G5E8X0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.36
Cldn20G5E8X0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn20G5E8X0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn20G5E8X0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn20G5E8X0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.32■□□□□ 0.36
Cldn20G5E8X0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn20G5E8X0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Cldn20G5E8X0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn20G5E8X0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cldn20G5E8X0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn20G5E8X0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn20G5E8X0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn20G5E8X0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn20G5E8X0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn20G5E8X0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn20G5E8X0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cldn20G5E8X0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn20G5E8X0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn20G5E8X0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.31■□□□□ 0.36
Cldn20G5E8X0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn20G5E8X0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cldn20G5E8X0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn20G5E8X0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn20G5E8X0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn20G5E8X0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.3■□□□□ 0.36
Cldn20G5E8X0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.3■□□□□ 0.36
Cldn20G5E8X0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn20G5E8X0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cldn20G5E8X0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn20G5E8X0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn20G5E8X0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn20G5E8X0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms