Protein–RNA interactions for Protein: F2Z478

Gm11238, Predicted gene 11238, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11238F2Z478 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11238F2Z478 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.07■□□□□ 0.96
Gm11238F2Z478 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.07■□□□□ 0.96
Gm11238F2Z478 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11238F2Z478 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11238F2Z478 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11238F2Z478 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm11238F2Z478 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm11238F2Z478 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gm11238F2Z478 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.06■□□□□ 0.96
Gm11238F2Z478 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Gm11238F2Z478 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11238F2Z478 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Gm11238F2Z478 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11238F2Z478 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11238F2Z478 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11238F2Z478 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11238F2Z478 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11238F2Z478 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11238F2Z478 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11238F2Z478 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11238F2Z478 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11238F2Z478 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11238F2Z478 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm11238F2Z478 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11238F2Z478 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11238F2Z478 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11238F2Z478 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11238F2Z478 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Gm11238F2Z478 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11238F2Z478 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11238F2Z478 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Gm11238F2Z478 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.02■□□□□ 0.96
Gm11238F2Z478 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11238F2Z478 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11238F2Z478 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11238F2Z478 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11238F2Z478 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11238F2Z478 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Gm11238F2Z478 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11238F2Z478 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gm11238F2Z478 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.02■□□□□ 0.95
Gm11238F2Z478 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm11238F2Z478 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm11238F2Z478 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm11238F2Z478 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.01■□□□□ 0.95
Gm11238F2Z478 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm11238F2Z478 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm11238F2Z478 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm11238F2Z478 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11238F2Z478 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21■□□□□ 0.95
Gm11238F2Z478 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11238F2Z478 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21■□□□□ 0.95
Gm11238F2Z478 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11238F2Z478 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11238F2Z478 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21■□□□□ 0.95
Gm11238F2Z478 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21■□□□□ 0.95
Gm11238F2Z478 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11238F2Z478 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11238F2Z478 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Gm11238F2Z478 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.99■□□□□ 0.95
Gm11238F2Z478 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.99■□□□□ 0.95
Gm11238F2Z478 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm11238F2Z478 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm11238F2Z478 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
Gm11238F2Z478 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm11238F2Z478 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11238F2Z478 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11238F2Z478 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11238F2Z478 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11238F2Z478 Gm27801-201ENSMUST00000184174 223 ntBASIC20.98■□□□□ 0.95
Gm11238F2Z478 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.98■□□□□ 0.95
Gm11238F2Z478 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11238F2Z478 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11238F2Z478 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11238F2Z478 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Gm11238F2Z478 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11238F2Z478 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11238F2Z478 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11238F2Z478 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11238F2Z478 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.96■□□□□ 0.95
Gm11238F2Z478 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11238F2Z478 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Gm11238F2Z478 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11238F2Z478 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Gm11238F2Z478 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Gm11238F2Z478 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.96■□□□□ 0.95
Gm11238F2Z478 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms